Pairwise Alignments

Query, 311 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 315 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 1 (from data) from Sinorhizobium meliloti 1021

 Score =  112 bits (280), Expect = 1e-29
 Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 23/301 (7%)

Query: 20  LRKPRRDWMGLLYVAPALLLVLVFFLVPLGMTAWMSLHNWPLIGMPRWIGFANYKVLWND 79
           +++PRR W  L+++ PAL++     ++PL  T   S +N  + G   ++G  N+KVL+ D
Sbjct: 13  IKRPRR-WHILVFLLPALVVYTAVMILPLFETLRQSFYN-TVDGQLTFVGLGNFKVLFGD 70

Query: 80  ----INFWNALA-----FTIRYTVAATVGLMLAGFGLALLIERPRPFANLYRNAFFLPVV 130
                +FWNAL      F I   V   +G+ LA    A+L      F   YR A FLP +
Sbjct: 71  PRWAADFWNALKNNFVFFLIHMAVQNPIGIALA----AMLSVPKLRFGAFYRTAIFLPTL 126

Query: 131 IGFASASLLWSWLSNVDSGLFSPLAETLGLTDGRVNLLATFAPSFWSVTAMVIWKMAGFY 190
           + F     +W  + +   G+   L +T+GL       L     +  +V+ + +W+  G  
Sbjct: 127 LSFVIVGFIWKLILSPIWGVAPYLLDTVGLRSLFGPWLGKPDTALIAVSLISVWQYIGIP 186

Query: 191 MVILMSGLQAIPTDFIEAARIDGANALQRFRFITLPLVRRSFALALILCISGSMLAFDQF 250
           M+++ + L  IP +  EAA +DG     +F  I LPL+  +  +  IL   G+  AFD  
Sbjct: 187 MMLIYAALLNIPDEVTEAAELDGVTGWSQFWKIKLPLILPAIGIVSILTFVGNFNAFDLI 246

Query: 251 YII---LAGGPQNKTITAVYWIFSQSFVSFRLGYG---AALSMVLLAILVVLSIVQLRLL 304
           Y +   LAG  ++  I     +  ++F  F+L  G      ++  +  L++L+ V L L 
Sbjct: 247 YTVQGALAGPDKSTDILGT--LLYRTFFGFQLQLGDRSMGATIAAIMFLIILAGVALYLF 304

Query: 305 G 305
           G
Sbjct: 305 G 305