Pairwise Alignments

Query, 311 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  132 bits (333), Expect = 8e-36
 Identities = 87/282 (30%), Positives = 144/282 (51%), Gaps = 12/282 (4%)

Query: 26  DWMGLLYVAPALLLVLVFFLVPLGMTAWMSLHNWPLIGMPRWIGFANYKVLWNDINFWNA 85
           D  G L+VAPAL L+ +F + P+  + WMS  +   + + ++ GFAN   LWND  F  A
Sbjct: 13  DVNGWLFVAPALGLITLFMVYPIAWSLWMSFQSGRGMTL-KFAGFANIVRLWNDPVFIKA 71

Query: 86  LAFTIRYTVAATVGLMLAGFGLALLIERPRPFAN-LYRNAFFLPVVIGFASASLLWSWLS 144
           L  T+ Y V     ++L    LA L+  PR     ++R A FLP V    + S+L+  + 
Sbjct: 72  LTNTMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMF 131

Query: 145 NVDSGLFSPLAETLGLTDGRVNLLATFAPSFWSVTAMVI---WKMAGFYMVILMSGLQAI 201
             D G+ +   + +GL    +  L      FW+   +++   W+  G+ M+  ++ LQ I
Sbjct: 132 ATD-GIVNSTLQAIGLAASPIPWLTH---PFWAKVLVILAITWRWTGYNMIFYLAALQNI 187

Query: 202 PTDFIEAARIDGANALQRFRFITLPLVRRSFALALILCISGSMLAFDQFYIIL--AGGPQ 259
                E ARIDG  A  R   +T+PL++       ++   G++  FD+ Y +    GGP 
Sbjct: 188 DKSIYEVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGGPS 247

Query: 260 NKTITAVYWIFSQSFVSF-RLGYGAALSMVLLAILVVLSIVQ 300
           N T+T   +I++ +F     LGY A +S V++ ++ +L+ VQ
Sbjct: 248 NATLTLSLYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFVQ 289