Pairwise Alignments

Query, 311 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 305 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  363 bits (932), Expect = e-105
 Identities = 176/293 (60%), Positives = 224/293 (76%), Gaps = 4/293 (1%)

Query: 21  RKPRRD--WMGLLYVAPALLLVLVFFLVPLGMTAWMSLHNWPLIGMPRWIGFANYKVLWN 78
           R+P+R   W GL+Y+APA+ LV +FF++P+  T WMSLH WPL+G P WIG  NY  ++ 
Sbjct: 13  RRPKRQAGWRGLIYIAPAMALVTLFFVLPVLFTLWMSLHKWPLLGEPAWIGLRNYTRMFT 72

Query: 79  DINFWNALAFTIRYTVAATVGLMLAGFGLALLIERPRPFANLYRNAFFLPVVIGFASASL 138
           D  F+NAL FT  YT+  T+ +    F LA+ +E+ RP  +LYR   FLPVV+G ASASL
Sbjct: 73  DARFFNALGFTAHYTLIVTIAIFAVAFPLAIFVEKQRPLVSLYRTIVFLPVVVGLASASL 132

Query: 139 LWSWLSNVDSGLFSPLAETLGLTDGRVNLLATFAPSFWSVTAMVIWKMAGFYMVILMSGL 198
           LW WL+NVDSGLF+PL + LGLT GR+NLLA F  +F ++  MV+WK+AGF M+IL++GL
Sbjct: 133 LWVWLANVDSGLFAPLFDMLGLTSGRINLLAKFDTAFLTIIVMVVWKIAGFTMIILLTGL 192

Query: 199 QAIPTDFIEAARIDGANALQRFRFITLPLVRRSFALALILCISGSMLAFDQFYIILAGGP 258
           QAIP +  EAARIDGA   QRFR +TLPL+RR+ ALALIL ++GS+LAFDQFYI+ +GGP
Sbjct: 193 QAIPAELTEAARIDGAGRWQRFRHLTLPLMRRTMALALILSVTGSILAFDQFYIMTSGGP 252

Query: 259 QNKTITAVYWIFSQSFVSFRLGYGAALSMVLLAILVVLSIVQLRLL--GDKEP 309
           QNK I+ VY+IF+QSFVSF LGYGAALS+ LL ILV LS+VQL LL  GD+ P
Sbjct: 253 QNKMISVVYYIFNQSFVSFNLGYGAALSIALLLILVTLSVVQLWLLKVGDERP 305