Pairwise Alignments

Query, 353 a.a., LacI family transcription regulator from Agrobacterium fabrum C58

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (319), Expect = 4e-34
 Identities = 94/331 (28%), Positives = 166/331 (50%), Gaps = 6/331 (1%)

Query: 17  ATIKDVAFAAGVSISTASKALNERGRMAAETRERIQSVAQQLGFRPNAMARALVGQRSFT 76
           ATI DV   AGVS +T S+ LNE G++ A+TRE + +  QQLG++PN++A+AL    + +
Sbjct: 11  ATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTNS 70

Query: 77  LGLLTNDTYGRFTLPIAAGLSAAMADRGVSVFLCAIDDEPERVRLSLEAMEDKRVDGLVV 136
           +GL+       +   I           G  + +    +  +  + ++  +  +R D +++
Sbjct: 71  IGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAILL 130

Query: 137 SGKRIDRVLPVDIPTVH-MPVVYVNAACPEGAI-GFVPDDEGGAHAAVSHLVGLGRKRIA 194
             + ++ V  +++   H  P+V +N       +  F  D    A  A+ HL+ LG ++IA
Sbjct: 131 YSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQIA 190

Query: 195 HVTGPRSFSAVSLREKGWRRALSEAALPCFGD-VLSGEWSEAFGYAAGQRFVASPISERP 253
            +T P       +R + +++AL E  +      V+ G+ +   GY A Q+ +   IS   
Sbjct: 191 CITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGIS--M 248

Query: 254 DAVFCGNDQIARGVIDALALSGIRVPEDIAVVGFDNWEIFATATRPPLTTVDMALKELGR 313
            AVF  ND +A G + A+   GI VP+ ++++G DN E  A    P L++V + + EL +
Sbjct: 249 TAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDN-EPAAAFAIPSLSSVSLPIGELTQ 307

Query: 314 QAGLTLLDMIDGKPVETGQRRLPCRLKVRES 344
           QA    +++ + KP +   R     L  RES
Sbjct: 308 QAISLAVEIANKKPQDAQHRLYQGSLIARES 338