Pairwise Alignments

Query, 304 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  196 bits (499), Expect = 4e-55
 Identities = 107/309 (34%), Positives = 177/309 (57%), Gaps = 6/309 (1%)

Query: 1   MLRFIRKRALASL--ISLIGLLIMVFFLSRLTGDPASLFLPVEASAE--MKAEFRALHGL 56
           MLRF  +R L  +  + ++ LLI V F        ASLF     +A+  M A      GL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 57  DQPLLVQFVQYVGNVMTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTICAIVVG 116
           ++PL+ +FV YV ++   DLG S R  +P +D++ +    +L LA+  M    + ++ +G
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120

Query: 117 SLAAFRTGGFFDRFSSMVSLIGASVPDFWLAIVAIVVFAIQLSWLPTSG--TGTLSHWIL 174
            +AA R G   D  + + ++ G S+P FWL ++ + +FA+QL+WLP+ G   G+  + IL
Sbjct: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGSFRNLIL 180

Query: 175 PICVLFVRPFGIIVQVVRGSMISALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVI 234
           P   L V P  ++ +  R  ++  L++ +++TA +KG+    ++  H  RNA++ ++T +
Sbjct: 181 PAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVTTV 240

Query: 235 GDQAASLLNGAVVIETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAFAIFLMNLVIDLA 294
           G Q  SL+  AVVIE +F +PG+G L++DS+  RD  VV   ILV      ++N  +DL 
Sbjct: 241 GLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVDLI 300

Query: 295 YALLDPRIR 303
           YA +DPRI+
Sbjct: 301 YAAIDPRIK 309