Pairwise Alignments

Query, 304 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  363 bits (931), Expect = e-105
 Identities = 184/304 (60%), Positives = 237/304 (77%)

Query: 1   MLRFIRKRALASLISLIGLLIMVFFLSRLTGDPASLFLPVEASAEMKAEFRALHGLDQPL 60
           M  FI +RA  SLI++IGLL++VFFLSRLTGDPA L+LP+++S   +  F   HG + PL
Sbjct: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETHGFNDPL 60

Query: 61  LVQFVQYVGNVMTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTICAIVVGSLAA 120
           +VQF +Y+ ++   D G++L + RPA++V LEAF  TL LAVI + L    A+VVGSLAA
Sbjct: 61  VVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAA 120

Query: 121 FRTGGFFDRFSSMVSLIGASVPDFWLAIVAIVVFAIQLSWLPTSGTGTLSHWILPICVLF 180
            R    FD+ +S  SL GAS PDFW+AIVAI+VF++ L  LPTSGTGT  HWI+PI VL 
Sbjct: 121 ARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTALHWIMPIFVLT 180

Query: 181 VRPFGIIVQVVRGSMISALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVIGDQAAS 240
           +RPFG++VQVVRG+M+ AL+S YVKTARAKGV    I+F HALRN++LPVITV GD AAS
Sbjct: 181 LRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSLLPVITVAGDLAAS 240

Query: 241 LLNGAVVIETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAFAIFLMNLVIDLAYALLDP 300
           L+NGAVV+ETIFG+PG+GKLMID+I++RDF ++ A +LVTA AIF++N+ IDL YA LDP
Sbjct: 241 LVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAIFVLNIAIDLVYARLDP 300

Query: 301 RIRY 304
           RIR+
Sbjct: 301 RIRF 304