Pairwise Alignments

Query, 315 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  158 bits (400), Expect = 1e-43
 Identities = 87/260 (33%), Positives = 147/260 (56%), Gaps = 4/260 (1%)

Query: 47  LVIILAIIGPTLLNELATKQNLRGRNLAPFDFSREWFMWLGADALGRPLWPRIIVATQNT 106
           LVI+  I+ P +    A    +   +L   +   +   W G D  GR ++ RI+   Q +
Sbjct: 16  LVILAGILAPWI----APFDPVLDADLMNSELPPDATFWFGTDGQGRDVYTRILYGAQIS 71

Query: 107 IMVAAGAVFISAVVGTLLGLIAGFSSQRTSQIIMRLADVIMSFPSLLVAVIVLYILGSSI 166
           + V   +  I++++G  LG+ AG+       ++    +V+++ PSL+ A+ V+ +LG  +
Sbjct: 72  LTVGIVSQVINSIIGVTLGMTAGYWGGWWDDLVNGFTNVMLAIPSLIFALAVMAVLGPGL 131

Query: 167 LNLMLVLSITRIPVYLRTTRAEVMEIRSRMFVQAARVMGASSKRILFRHILPVVLPTLTT 226
            +L++ L +T      R  R+  + ++S  +VQAA+ +G    RI+F  ILP ++  +  
Sbjct: 132 PSLLIALGLTNWSWTCRIARSSTLSLKSLGYVQAAQTLGYGDLRIMFTQILPNMMGPILV 191

Query: 227 LATLDFAYVMLAESALSFLGIGIQPPEITWGLMISQGRQYLTNAWWLSFWPGLAIILTTL 286
           +ATL     +L+E+ALSFLG+GIQPP  +WG M++  RQ +  A W++ +PGLAI L+ L
Sbjct: 192 MATLGMGSAVLSEAALSFLGLGIQPPFPSWGSMLTDARQLIQLAPWVAIFPGLAIFLSVL 251

Query: 287 SLNLLSNWLRIALDPVQRWR 306
             NLL + LR +LDP  R R
Sbjct: 252 GFNLLGDGLRDSLDPHMRTR 271