Pairwise Alignments

Query, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

 Score =  456 bits (1173), Expect = e-132
 Identities = 249/531 (46%), Positives = 354/531 (66%), Gaps = 18/531 (3%)

Query: 1   MADHLLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLID 60
           +A++L+EVR+L+V+F T     + V  +++ + +GETLA++GESGSGKSV++ +I+ L+ 
Sbjct: 6   IAENLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLP 65

Query: 61  MPPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALR 120
            P  +   G+IL +G+DLLK      R + G  IAM+FQ+P++ LNP++TVG Q+ E L 
Sbjct: 66  YPLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLE 125

Query: 121 TH-GIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIA 179
            H G+  + A    L L + V +PEP K +  YPHE SGGQRQRV+IAMALA +P LLIA
Sbjct: 126 IHKGLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIA 185

Query: 180 DEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGT 239
           DEPTTALDVTVQ ++L LLKELQ   GM +L+I+HDL +V  +A RV VM++G +VE   
Sbjct: 186 DEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQAL 245

Query: 240 VREVYRNPQHPYTKKLIAAAPGKGQLHEPSTDGEPILKVRN-----------ARKSYGGF 288
             +++R PQHPYT++L+AA P  G +     +  P+L+V +            R++    
Sbjct: 246 CEDLFRAPQHPYTQELLAAEPSGGPV--AVEEAPPLLEVDDLRVWFPIKKGLLRRTVDHI 303

Query: 289 EALKGISFDLKAGETVAVVGESGSGKSTLARILLRLDDPDSGTAHWKGQDLFTLSPSELF 348
           +A+ G++F L  G+T+ +VGESGSGKSTL   +LRL     G   ++GQ L ++S  ++ 
Sbjct: 304 KAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRLLG-SRGEIRFQGQHLQSMSQRQVR 362

Query: 349 KLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRARA-AELLERVGLSPE 407
            LRR +Q+VFQDP  SL+PRM+V Q++ E   IH   +  AK + +A  E L  VGL PE
Sbjct: 363 PLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHR--MGNAKEQEQAIIEALVEVGLDPE 420

Query: 408 HMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGI 467
              RYPH+FSGGQRQRIAIARAL L+P LI+ DE  SALD +VQ QVV LL  L+ +  +
Sbjct: 421 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNL 480

Query: 468 AFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQALISA 518
            ++FI+HDL +VR  +  +MV+++G+VVE G  A +F  PQ  YTQ L+ +
Sbjct: 481 TYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLES 531



 Score =  181 bits (460), Expect = 5e-50
 Identities = 114/282 (40%), Positives = 166/282 (58%), Gaps = 26/282 (9%)

Query: 2   ADHLLEVRNLSVDFYTATGT-------VKAVRNISYHVDRGETLAILGESGSGKSVSSSA 54
           A  LLEV +L V F    G        +KAV  +++ + +G+TL I+GESGSGKS    A
Sbjct: 276 APPLLEVDDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLA 335

Query: 55  IMNLIDMPPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQ 114
           I+ L+       S GEI   G+ L  MS    R +  R + ++FQDP   L+P  +VG  
Sbjct: 336 ILRLLG------SRGEIRFQGQHLQSMSQRQVRPLR-RQMQVVFQDPFGSLSPRMSVGQI 388

Query: 115 MREALRTHGIDNRQAQVEAL-RLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALK 173
           + E L  H + N + Q +A+      V L +PE    +YPHEFSGGQRQR+ IA AL LK
Sbjct: 389 VGEGLHIHRMGNAKEQEQAIIEALVEVGL-DPETR-HRYPHEFSGGQRQRIAIARALVLK 446

Query: 174 PNLLIADEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGV 233
           P L++ DEPT+ALD TVQ +V+ LL+ LQ +  +  L I+HDL VV  ++ +++V+++G 
Sbjct: 447 PALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQ 506

Query: 234 LVESGTVREVYRNPQHPYTKKLIAAA---------PGKGQLH 266
           +VE G   +++  PQHPYT++L+ +A         P +GQ H
Sbjct: 507 VVEQGAAADIFAAPQHPYTQQLLESAFMAPGTAEQPEEGQAH 548