Pairwise Alignments

Query, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  464 bits (1193), Expect = e-135
 Identities = 263/558 (47%), Positives = 359/558 (64%), Gaps = 40/558 (7%)

Query: 5   LLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           +L V NL   F         V+ +S+ +   ET+A++GESGSGKSV++ +IM L + P G
Sbjct: 27  VLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIMRL-NSPRG 85

Query: 65  KISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTH-G 123
               G + L GK+LL +S  + R + G  IAMIFQ+P++ LNPV T+G+Q+ E+L  H G
Sbjct: 86  TKIEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRG 145

Query: 124 IDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEPT 183
           +   QA+ E +RL ++V +P  +    +YPH FSGG RQRVMIAMALA KP LLIADEPT
Sbjct: 146 LSRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPT 205

Query: 184 TALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVREV 243
           TALDVT+QA++L L+KELQ+E GM VL ITHD+GVV+E+ADR VVM KG  VE+ +  ++
Sbjct: 206 TALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDI 265

Query: 244 YRNPQHPYTKKLIAAAPGKGQLHEPS----------TDGE----------------PILK 277
           +  P HPYT+ L++A P  G +   S          + GE                P+L+
Sbjct: 266 FNRPNHPYTRSLLSAVPKLGSMAGRSRPMRFPVVDRSTGEADVPVEVPDTVKVSERPVLE 325

Query: 278 VRNARKSY----GGFEALKG-------ISFDLKAGETVAVVGESGSGKSTLARILLRLDD 326
           V    K +    G F  +KG       +SF +KAGET+A+VGESG GKST  R ++RL +
Sbjct: 326 VAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMRLVE 385

Query: 327 PDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEIL 386
           P  G     G D+  LS +EL   R  +QM+FQDP  SLNPRM +   I+E  +I+ +  
Sbjct: 386 PSGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLINGKG- 444

Query: 387 PKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSAL 446
            +++   + AELL++VGLSP+   R+PH+FSGGQRQRI IARALALEP+LIV DEAVSAL
Sbjct: 445 GQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVSAL 504

Query: 447 DVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDN 506
           DVSV++QVV L+  L+  MG+A++FI+HD+ +V   +  V VM  GE+VE G+   +F N
Sbjct: 505 DVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQN 564

Query: 507 PQQRYTQALISATLDPDP 524
           PQ  YT+ L+SA    DP
Sbjct: 565 PQHPYTRRLLSAVPIADP 582