Pairwise Alignments
Query, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58
Subject, 541 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Score = 446 bits (1147), Expect = e-129
Identities = 254/528 (48%), Positives = 348/528 (65%), Gaps = 18/528 (3%)
Query: 5 LLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
+L VR+L++ AV +IS+ V G+ + +LGESGSGKSV +SAIM L+ PPG
Sbjct: 10 VLSVRDLTIALPPGADRPHAVSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLL--PPG 67
Query: 65 -KISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTHG 123
+ G I L G+ LL S RA+ G +AM+FQ+P++ LNPV T G Q+ E L H
Sbjct: 68 LRPVKGAIELRGQALLSCSQAALRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLAQH- 126
Query: 124 IDNRQAQVEA--LRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADE 181
+ +A+ A L + +RV LPEPE+ YPH+ SGGQRQR++IAMAL LKP LLI DE
Sbjct: 127 VKRPKAERRAAILAIMERVRLPEPERIYASYPHQLSGGQRQRIVIAMALILKPALLICDE 186
Query: 182 PTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVR 241
PTTALDVT QAE+L L+ ELQRE G VL ITHD GVV+E+AD VVV+E G ++E G
Sbjct: 187 PTTALDVTTQAEILKLILELQRENGTAVLFITHDFGVVAEIADEVVVLELGAMIEKGDKH 246
Query: 242 EVYRNPQHPYTKKLIAAAPGKGQLHEPSTDGE-PILKVRNARKSY--GGF-------EAL 291
V P+ PYTK L+AA P P+ + P+L+ ++ K+Y GG+ +A
Sbjct: 247 AVLTAPRQPYTKMLLAAVPELSPPDRPAVENAYPLLQAKDLCKTYVSGGWPGKRRVVQAA 306
Query: 292 KGISFDLKAGETVAVVGESGSGKSTLARILLRLDDPDSGTAHWKGQDLFTLSPSELFKLR 351
KG+S ++ GET+ +VGESGSGKST+AR + RL DP SG G+ + T + EL R
Sbjct: 307 KGVSLMVRPGETIGIVGESGSGKSTVARCIARLIDPTSGDIFADGRSVATATKRELSPFR 366
Query: 352 RDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRARAAELLERVGLSPEHMGR 411
R +Q+VFQDP +SLNPR TV + I E V +P+A+ A+A EL+ V L P+ + R
Sbjct: 367 RHVQVVFQDPYRSLNPRQTVGESIIEGPVNFG--VPRAEAWAKAEELMHLVRLKPDALRR 424
Query: 412 YPHQFSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIAFIF 471
YP++FSGGQRQRI+IARALA P++++ DEAVSALDVSVQAQ++ LL++++ + I +F
Sbjct: 425 YPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQGRLRIGILF 484
Query: 472 IAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQALISAT 519
+ HDL + D+V+VM KGE+VE G + VF P+ YT+ L++A+
Sbjct: 485 VTHDLRVASQICDHVLVMYKGEIVEEGAIRDVFFAPRHPYTRKLLAAS 532
Score = 194 bits (492), Expect = 9e-54
Identities = 108/241 (44%), Positives = 156/241 (64%), Gaps = 8/241 (3%)
Query: 22 VKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPGKISSGEILLNGKDLLKM 81
V+A + +S V GET+ I+GESGSGKS + I LID +SG+I +G+ +
Sbjct: 303 VQAAKGVSLMVRPGETIGIVGESGSGKSTVARCIARLIDP-----TSGDIFADGRSVATA 357
Query: 82 SADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTHGIDNRQAQVEALRLFKRVA 141
+ + R + ++FQDP LNP TVG + E G+ +A +A L V
Sbjct: 358 TKRELSPFR-RHVQVVFQDPYRSLNPRQTVGESIIEGPVNFGVPRAEAWAKAEELMHLVR 416
Query: 142 LPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEPTTALDVTVQAEVLALLKEL 201
L +P+ A+ +YP+EFSGGQRQR+ IA ALA P +LIADE +ALDV+VQA++L LL+E+
Sbjct: 417 L-KPD-ALRRYPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEI 474
Query: 202 QRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVREVYRNPQHPYTKKLIAAAPG 261
Q +G+L +THDL V S++ D V+VM KG +VE G +R+V+ P+HPYT+KL+AA+PG
Sbjct: 475 QGRLRIGILFVTHDLRVASQICDHVLVMYKGEIVEEGAIRDVFFAPRHPYTRKLLAASPG 534
Query: 262 K 262
+
Sbjct: 535 R 535
Score = 175 bits (443), Expect = 4e-48
Identities = 107/251 (42%), Positives = 152/251 (60%), Gaps = 8/251 (3%)
Query: 290 ALKGISFDLKAGETVAVVGESGSGKSTLARILLRLDDPD----SGTAHWKGQDLFTLSPS 345
A+ ISFD+ G+ V ++GESGSGKS +A ++ L P G +GQ L + S +
Sbjct: 29 AVSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLLPPGLRPVKGAIELRGQALLSCSQA 88
Query: 346 ELFKLR-RDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRARAAELLERVGL 404
L LR + MVFQ+P +LNP MT I E H + PKA+ RA ++ERV L
Sbjct: 89 ALRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLAQHVK-RPKAERRAAILAIMERVRL 147
Query: 405 -SPEHM-GRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQVVRLLDKLR 462
PE + YPHQ SGGQRQRI IA AL L+P L++CDE +ALDV+ QA++++L+ +L+
Sbjct: 148 PEPERIYASYPHQLSGGQRQRIVIAMALILKPALLICDEPTTALDVTTQAEILKLILELQ 207
Query: 463 REMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQALISATLDP 522
RE G A +FI HD +V + AD V+V++ G ++E G V P+Q YT+ L++A +
Sbjct: 208 RENGTAVLFITHDFGVVAEIADEVVVLELGAMIEKGDKHAVLTAPRQPYTKMLLAAVPEL 267
Query: 523 DPDVQAANRNA 533
P + A NA
Sbjct: 268 SPPDRPAVENA 278