Pairwise Alignments

Query, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 610 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  478 bits (1231), Expect = e-139
 Identities = 261/569 (45%), Positives = 368/569 (64%), Gaps = 40/569 (7%)

Query: 5   LLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           +L V++L+  F      +  VR++S+ V  GETLAI+GESGSGKSV+S ++M L+     
Sbjct: 14  VLSVKHLTTSFRGEDDWLPVVRDLSFDVYPGETLAIVGESGSGKSVTSLSVMRLLKAQSS 73

Query: 65  KISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTH-G 123
           +I  GE+ LN + LL +S    R + G  +AMIFQ+P++ LNP +++G Q+ E+L+ H G
Sbjct: 74  RIE-GEVWLNQRSLLALSDKQMRDIRGNDMAMIFQEPMTSLNPTFSIGRQIAESLKRHRG 132

Query: 124 IDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEPT 183
           + + +A+ E LRL ++V +P   K  D+YPH+FSGG RQRVMIAMALALKP LLIADEPT
Sbjct: 133 MSSSEARAETLRLLEKVRIPNATKRFDEYPHQFSGGMRQRVMIAMALALKPKLLIADEPT 192

Query: 184 TALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVREV 243
           TALDVT+Q ++L L+K LQ E GM VL ITHD+GVV+E+ADR +VM +G  VESG   ++
Sbjct: 193 TALDVTIQGQILDLIKTLQEEEGMAVLFITHDMGVVAEIADRTLVMYRGEAVESGATEDI 252

Query: 244 YRNPQHPYTKKLIAAAPGKG----------------QLHEPSTDGE----------PILK 277
           +  PQHPYT+ L+AA P  G                Q  E S  GE          P+L 
Sbjct: 253 FHRPQHPYTRALLAAVPKLGSMQGRDWPLRFPQINLQTGEASVPGEVAGTVASGLTPLLS 312

Query: 278 VRNA-----------RKSYGGFEALKGISFDLKAGETVAVVGESGSGKSTLARILLRLDD 326
           V+N             +  G   A++ ISFDL  GET+++VGESG GKST  R + RL  
Sbjct: 313 VKNLSARFPVYGGIFSRQVGAVHAVENISFDLFQGETLSLVGESGCGKSTTGRAVTRLLK 372

Query: 327 PDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEIL 386
           P SG   + G D+  L   ++ ++R+ +QM+FQDP  SLNPRM +   + E  + H ++ 
Sbjct: 373 PHSGAIDFDGFDVMNLGKRDILQMRQRIQMIFQDPFASLNPRMRIGDALIEPMLQH-KLH 431

Query: 387 PKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSAL 446
            ++  + +AA LL++VGLSP+ + R+PH+FSGGQRQRI IARAL L+P++IV DE+VSAL
Sbjct: 432 NRSDAKEKAASLLQKVGLSPDMLRRFPHEFSGGQRQRICIARALTLDPKVIVADESVSAL 491

Query: 447 DVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDN 506
           DVSV+AQVV LL  L+  M ++++FI+HD+ +V   +  V VM  GE+VE G  A +FDN
Sbjct: 492 DVSVKAQVVNLLLDLQESMNLSYLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAIFDN 551

Query: 507 PQQRYTQALISATLDPDPDVQAANRNARL 535
           PQ  YT+ L+++   PDP  +   R  ++
Sbjct: 552 PQHAYTRKLMASVPVPDPSRRMLKRQMQV 580