Pairwise Alignments

Query, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 599 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  469 bits (1208), Expect = e-136
 Identities = 257/563 (45%), Positives = 366/563 (65%), Gaps = 39/563 (6%)

Query: 1   MADHLLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLID 60
           M   +L+V  L+  F      +  VR++S+ +   ETLA++GESGSGKSV++ ++M L+D
Sbjct: 1   MQPPVLQVDKLNTAFSVGGEWLNVVRDLSFSIGPKETLALVGESGSGKSVTAMSVMRLLD 60

Query: 61  MPPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALR 120
               + S G I  +G+DLL ++    +++ G  I MIFQ+P++ LNPV  +G Q+ E L+
Sbjct: 61  EKQTRYS-GNIRFDGQDLLSLNRSQMQSIRGNRIGMIFQEPMTSLNPVLKIGVQITEVLK 119

Query: 121 TH-GIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIA 179
            H G+D++ A+ EA+RL ++V +P     +++YP  FSGG RQRV+IA+ALA  P LLIA
Sbjct: 120 RHRGMDDKTARAEAVRLLEKVRIPAATARLNEYPLSFSGGMRQRVVIAIALACNPRLLIA 179

Query: 180 DEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGT 239
           DEPTTALDVT+QA++LAL+K LQ E GM VL ITHD+GVV+EVADR +VM +G  VE  T
Sbjct: 180 DEPTTALDVTIQAQILALIKSLQEEEGMSVLFITHDMGVVAEVADRTLVMHRGEAVEQAT 239

Query: 240 VREVYRNPQHPYTKKLIAAAPGKGQLHE-------PSTD------------------GEP 274
            RE++ +P HPYT+ L++A P  G ++        P TD                  G+P
Sbjct: 240 TREIFHHPTHPYTRALLSAVPRLGAMNGVALPKRFPLTDSQTGEVLPVAESVDTLRTGQP 299

Query: 275 ILKVRN-----------ARKSYGGFEALKGISFDLKAGETVAVVGESGSGKSTLARILLR 323
           +L+V+N            R+      A++ +SF L+ GET+++VGESG GKST  R +LR
Sbjct: 300 VLEVKNLVTRFDVRSGLLRRVSARVHAVEDLSFSLQPGETLSLVGESGCGKSTTGRTILR 359

Query: 324 LDDPDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHP 383
           L +  SG    +GQD+     + L  +R   QM+FQDP +SLNPRM + Q I+E  +I  
Sbjct: 360 LTEATSGDVLIRGQDIRRADNARLADIRTQAQMIFQDPYESLNPRMRIGQAIAEP-MISL 418

Query: 384 EILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAV 443
            +      + R A+LLE+VGL      R+PHQFSGGQRQRI IARALALEP++I+ DEAV
Sbjct: 419 GLHDAESAKRRVAQLLEQVGLQSNMATRFPHQFSGGQRQRICIARALALEPKMIIADEAV 478

Query: 444 SALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQV 503
           SALDVSV+AQV+ L+  L++E+G+A++FI+HD+ +V   +  V VM  GE+VE G+ A +
Sbjct: 479 SALDVSVKAQVINLMLDLQQELGLAYLFISHDMAVVERISHRVAVMYLGEIVEIGSRADI 538

Query: 504 FDNPQQRYTQALISATLDPDPDV 526
           F+NPQ  YT+ L++A   PDPDV
Sbjct: 539 FENPQHAYTRKLLAAVPVPDPDV 561