Pairwise Alignments

Query, 884 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  370 bits (949), Expect = e-106
 Identities = 229/616 (37%), Positives = 330/616 (53%), Gaps = 51/616 (8%)

Query: 245 KSTMPEFIPPQLCETLDRPPSAKGWIHEIKFDGYRIQTRIENGEVTLKTRKGLDWTAKYP 304
           +S  P FI P       RPP    W+HEIK DGYR Q  I  G++TL TR GLDWT ++ 
Sbjct: 52  QSAFPAFIEPCHPTLKKRPPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFE 111

Query: 305 AIATSAANLP--DAIIDGEICALDENGAPDFAALQAALSEGKTDELVYFAFDLLFEENED 362
           AIAT+A +L   D ++DGE+    + G PDF AL+  L++  +  L + AFDLL  +  D
Sbjct: 112 AIATAAEDLAGHDVVMDGEVTVFGKTGLPDFQALRRELAKRSSPNLTFQAFDLLHLDGYD 171

Query: 363 LRQLPLTERKERLQTLLDDAGEDPRLRFVEHFETG-GDAVLKSACKLSLEGIVSKQADAP 421
           LR++PL ERK  L+ L+ DA     + +V++ E   G+ V + ACK+ LEGIVSK+ DAP
Sbjct: 172 LRRVPLIERKRVLRELIGDAAGT--IAYVDYLELEEGEPVYRHACKMGLEGIVSKRKDAP 229

Query: 422 YQSGRTETWAKSKCRAGHEVVIGAYAKTNG----KFRSLLVGVFKGDHFVYVGRVGTGYG 477
           Y+SGR E W K+KC       I A+ +  G    +  SL +G ++GD  VY G+  TGY 
Sbjct: 230 YRSGRQEIWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLYLGRWEGDRLVYAGKAQTGYT 289

Query: 478 AKTVDTILPRLRELETSKSPFTGIGAPKKDPNVVWVKPELVAEIQFAGWTADGLVRQAAF 537
                 +  RL  L   KSP   +  P   P   WV+P++ AEI + G T DGL+R+  F
Sbjct: 290 LTAAREVRERLNPLIIGKSP---LSHPINKPKATWVEPQVYAEIDYGGVTDDGLLREPVF 346

Query: 538 KGLREDKPAHEVEAEKPASPAKTDTPTPAKSKPSRPARGKNAKAEVMGVMISSPDKALWP 597
           KGL++   A    A KP        PT A      PA  +   A ++ ++     +A+ P
Sbjct: 347 KGLQDVSRA----AGKPK-------PTTA------PASIRVPPANILQLL----PEAVVP 385

Query: 598 DANDGEPVTKEDLARYHEAVGPWLIDHIKGRPCSIIRTPDGIGGEVFFQRHAMPGTS--- 654
                   +KE+LA Y   V    +  + GRP  ++R    I G  F+ +  +P      
Sbjct: 386 --------SKEELANYWTRVADRALHFLGGRPLKLVRH---IHGTTFYHKGPLPPIPPEV 434

Query: 655 NLIELVKVFGDKKPYLQIDRVEGLAAIAQIGGVELHPWNCEPGQPEVPGRLVFDLDPGPD 714
           + + + K  G     L +D + GL  + +IG VELHPW       E    L+FDLDPG  
Sbjct: 435 HQLRIEKREGGAGVRLWVDDLAGLLGLVEIGAVELHPWAASVDDIEHADALIFDLDPGEG 494

Query: 715 VPFSTVVEAAREMRDRLEELGLVSFCKTTGGKGLHVVTPLAVPKGKKLSWPEAKGFAHDV 774
           V ++ VVE A  +R+ LE  G  ++ K TGGKG+H+++PL      K++   A  +A  +
Sbjct: 495 VSWAFVVETALRLREFLEAEGFKTWPKLTGGKGVHLMSPLPA----KMTHNAAHAYAKRL 550

Query: 775 CMQMARETPELYLIKMAKNQRNGRIFLDYLRNDRMATAVAPLSPRARAGAPVSMPLSWKQ 834
             Q A   P+ Y+     ++R G++FLDYLRN R  TAV   SPRAR+G PV+ P++W+ 
Sbjct: 551 AQQFASTDPDRYVTSAQLSRRPGKLFLDYLRNGRGTTAVGTYSPRARSGFPVAAPVTWRD 610

Query: 835 VKTDLDPKRFTIRTVP 850
           ++  + P  FTI   P
Sbjct: 611 IERGIKPDAFTIGRPP 626