Pairwise Alignments

Query, 884 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

 Score = 52.8 bits (125), Expect = 6e-11
 Identities = 82/329 (24%), Positives = 133/329 (40%), Gaps = 46/329 (13%)

Query: 204 FMVQSGDVQADAVWDSNHGLAAEERASDTKAKRKPALK----KPAKSTMPEFIPPQLCET 259
           F V    V+      ++ GL  E+  S +  +  P LK    +P K  + +  P      
Sbjct: 182 FNVNKESVEKIYAVTNDIGLLGEKLISGSDIENDPELKLKVFRPIKPMLAQLTP----SI 237

Query: 260 LDRPPSAKGWIHEIKFDGYRIQTRIENGEVTLKTRKGLDWTAKYPAIATSAANL--PDAI 317
            D     K    E K+DG R+Q    NG+V + +R+  + T   P +      L   + I
Sbjct: 238 EDAMIETKMPQFETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEIKKLDIDNII 297

Query: 318 IDGEICALDENGA---PDFAALQAALSEGKTDEL-------VYFAFDLLFEENEDLRQLP 367
           ++GE  A+D +     P    L+    +   D++       +YF FD+L+  N  L   P
Sbjct: 298 LEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIALRIYF-FDVLY-YNRGLIDTP 355

Query: 368 LTERKERLQTLLDDAGEDPRLRFVE-------------HFETGGDAVLKSACKLSL---- 410
           L  R+E L+ L      D  L  ++                +G   ++K     SL    
Sbjct: 356 LKTRREILEKLFGTNNWDSELEKIKKEIFSSKMLFSSFKLNSGDPNLVKEFFNWSLSIGH 415

Query: 411 EGIVSKQADAPYQSG-RTETWAKSKCRAGHEVVIGAYAKTN-GK----FRSLLVGVFKGD 464
           EGI+ K  DAPY  G R +T  K K    +  V+   AK   GK    + S  + V   D
Sbjct: 416 EGIMIKNPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKDWYGSYELSVKDND 475

Query: 465 HFVYV-GRVGTGYGAKTVDTILPRLRELE 492
             ++V G VG+G     ++ +   + E++
Sbjct: 476 GNLHVIGNVGSGLTEDDLEKLTKIVNEIK 504