Pairwise Alignments

Query, 345 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  154 bits (388), Expect = 7e-42
 Identities = 96/240 (40%), Positives = 125/240 (52%), Gaps = 15/240 (6%)

Query: 36  MPDRVEPCLAMLKPVPPTGPDWAYEIKWDGYRLAVHIEPKGVRIITRGGHDWTHRFPTIA 95
           +PD +EP L      PP   DW +EIK+DGYR+ + I    V + TR G DWT ++P IA
Sbjct: 243 LPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAKYPEIA 302

Query: 96  AAAKRLGIGTAILDGEAVVLNSEGRSDFGALQRSLGGRGGKRASSESILFAFDLLYFDGH 155
            AA  L     I+DGE   L+  G  DF ALQ +L     +  +   + FAFDLL+  G 
Sbjct: 303 DAASEL--PDCIIDGEICALDDNGAPDFAALQAAL----SEGKTGNLVYFAFDLLFDGGE 356

Query: 156 DLTKTELSVRRHLLTDLLDGAVGA----IQLSEEVAGEGAELLENARSLGLEGIIAKHRD 211
           DL    L  R+  L D L  A G+    I+  +     G  +L +A  L LEGI++K  D
Sbjct: 357 DLRSMRLVERKKRLEDFL--AAGSDDPRIRYVDHFESGGDAVLRSACKLSLEGIVSKQMD 414

Query: 212 SPYRPGRTGDWLKIKCIQSESFMIVGYEQSAAARGGVGSLLLAARRDHDWVYVGAVGTGF 271
           +PY+ GRT  W K KC      +I GY   A   G   SLL+   R   +VYVG VGTGF
Sbjct: 415 APYQSGRTDTWAKSKCRAGHEVVIGGY---ATTNGKFRSLLVGVHRGDHFVYVGRVGTGF 471