Pairwise Alignments

Query, 345 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

 Score = 64.7 bits (156), Expect = 6e-15
 Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 36/286 (12%)

Query: 32  PFDPMPDRVEPCL--AMLKPVPPTGPDWAYEIKWDGYRLAVHIEPKGVRIITRGGHDWTH 89
           P  PM  ++ P +  AM++   P      +E K+DG R+ VH     V+I +R   + T+
Sbjct: 225 PIKPMLAQLTPSIEDAMIETKMPQ-----FETKYDGARVQVHKSNGDVKIYSRRLENITN 279

Query: 90  RFPTIAAAAKRLGIGTAILDGEAVV--LNSEGRSDFGALQRSLGGRGGKRASSESI---L 144
             P +    K+L I   IL+GE V   L+S     F  + R    +      +E I   +
Sbjct: 280 SVPELVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIALRI 339

Query: 145 FAFDLLYFDGHDLTKTELSVRRHLLTDLLDG-------------------AVGAIQLSEE 185
           + FD+LY++   L  T L  RR +L  L                         + +L+  
Sbjct: 340 YFFDVLYYN-RGLIDTPLKTRREILEKLFGTNNWDSELEKIKKEIFSSKMLFSSFKLNSG 398

Query: 186 VAGEGAELLENARSLGLEGIIAKHRDSPYRPG-RTGDWLKIKCIQSESFMIVGYEQ--SA 242
                 E    + S+G EGI+ K+ D+PY PG R     K+K       ++V   +    
Sbjct: 399 DPNLVKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMG 458

Query: 243 AARGGVGSLLLAAR-RDHDWVYVGAVGTGFKEKDAAYLKKTLDTLK 287
             +   GS  L+ +  D +   +G VG+G  E D   L K ++ +K
Sbjct: 459 KRKDWYGSYELSVKDNDGNLHVIGNVGSGLTEDDLEKLTKIVNEIK 504