Pairwise Alignments

Query, 270 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  187 bits (476), Expect = 2e-52
 Identities = 106/263 (40%), Positives = 159/263 (60%), Gaps = 8/263 (3%)

Query: 1   MAVRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETQNRVVSHYVDSVTGKEVKD 60
           MA R  WKGY++LSLV+CPV++ PATS SE++ F+ L+++T NR+    VD   G  V+ 
Sbjct: 1   MAPRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGL-VER 59

Query: 61  EDEVKGYQRGENEYIILEDEELENVALDSTKTIDISTFTPRDSVEWIWLDTPYYLSPNDP 120
            D VKGY+  + +YII+ED +LE+V ++S  T++I  F    SV+ I+ D PYYL+P+  
Sbjct: 60  SDLVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGA 119

Query: 121 VGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDTYF 180
           + +E F V+R+A+     + I+RLV+S RER V + PR  G+ + TLR  +EVR    YF
Sbjct: 120 MAEETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYF 179

Query: 181 AGIDDEETADREMMPLVQQLIKKQTKHWDAKMVIDPVQERLLDIIAAKKKALKKSARAKP 240
             I   +  D EM+ L + LI+++T  +D K   D  +  L+ +I  K K  K      P
Sbjct: 180 GNIPVGK-PDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKPIIAQAP 238

Query: 241 SAPAKSTPSNVINIMDALKKSVA 263
                    NV+N+MDALK S++
Sbjct: 239 ER------GNVVNLMDALKASLS 255