Pairwise Alignments

Query, 298 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 301 a.a., Ku from Pseudomonas syringae pv. syringae B728a

 Score =  122 bits (306), Expect = 1e-32
 Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 17/302 (5%)

Query: 5   RANWKGFIKYGEVACPVALYTAASSSERIAFNTLNRKTGNRVKREFVDSETGDPVERDEQ 64
           RA WKG I +G V  PVAL +A +S+  + F+ L++++ + V  + ++  TG  V  +  
Sbjct: 3   RAIWKGAISFGLVHIPVALVSATTSTS-VDFDWLDKRSMDPVGYKRINKVTGKEVTSENI 61

Query: 65  VKGYEVENGQYIILEPEEVAAAVPDSDKTLKIDAFIPCHEIDDVYFDKPYYLAPDKMGTD 124
           VKG   E  +Y++L  EE+ +A P S +T+ I AF+   +I     D PY+L PDK G  
Sbjct: 62  VKGVAYEKDRYVVLSEEEIRSAHPKSTQTIDIFAFVDSQQIPLQNIDTPYFLTPDKRGEK 121

Query: 125 AFLLLRDGMKKAKVAAIARTVLFRRVRTVLIRPHGKGLIATTLNFDYEVR--SSQEAFEE 182
            + LLR+ +   K  A+A  VL  R     + P    L+   L +  +VR   + E  + 
Sbjct: 122 VYALLRETLVDTKKVALANVVLHTREHLAAVMPLESALVMVILRWPADVRELDTLELSDA 181

Query: 183 LPDLKIEGEMLELAEHIIGTKKGSFDASAFDDRYEAAVAELVKAKIEGRALPKKKAPPAS 242
           + D K+     ++A+ ++      +    + D ++  +  LVK K +   +   +  PA 
Sbjct: 182 VTDAKLNKSERDMAKRLVKDMSADWQPEQYRDTFQDKIMHLVKTKADEGEIEDVETDPAE 241

Query: 243 KP---------SDLLQALRESAGVVAKAASKRTAAN---VNKGTSRQKVAKAAAAKTKSA 290
           +          +DLL+      G   KA + + AA     +K  +R K  + AA K  S 
Sbjct: 242 EERKSADVIDLTDLLRRSLAGKGGAGKAKTSKPAAKEKPADKDGARPK--RPAARKKTSK 299

Query: 291 AS 292
           AS
Sbjct: 300 AS 301