Pairwise Alignments

Query, 258 a.a., exodeoxyribonuclease III from Agrobacterium fabrum C58

Subject, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (367), Expect = 6e-40
 Identities = 94/265 (35%), Positives = 138/265 (52%), Gaps = 14/265 (5%)

Query: 1   MKLATYNVNGINGRLEVLLRWLAEAKPDVVCLQELKAPNDKFPRREIERAGYGAIWRGQK 60
           MK+ ++N+NG+  RL  L   + + +PDV+ LQE+K  ++ FPR+E+E  GY   + GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 61  SWNGVAILARDQEPRETRRGLPGDPDDSHSRYIEAAI---DGIVIGCL--YLPNG-NPAP 114
           +  GVAIL + Q P E  +G P D ++   R I A     +G     L  Y P G N   
Sbjct: 61  AHYGVAILCK-QTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEH 119

Query: 115 GPKFDYKLRWFERLYSYAAELFELDVPVALVGDFNVMPTDLDV----YKPERW--RDDAL 168
             KF YK +++  L +Y  E       + ++GD N+ P DLD+       +RW       
Sbjct: 120 ETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCS 179

Query: 169 FRPEVRAAYAELIAMGWTDAVRLLHPE-ERIYTFWKYFRNAFARDAGLRIDHFLLSPSLR 227
           F+PE R     L+  G  D  R LHP+    ++++ Y    F  + GLRID  L +P+L 
Sbjct: 180 FQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLA 239

Query: 228 ERLQTCGVDKFARAWEHTSDHAPVW 252
           E  Q  G+D   RA +  SDHAP+W
Sbjct: 240 ETCQEAGIDYELRAIDKPSDHAPIW 264