Pairwise Alignments

Query, 258 a.a., exodeoxyribonuclease III from Agrobacterium fabrum C58

Subject, 262 a.a., exodeoxyribonuclease III from Caulobacter crescentus NA1000

 Score =  206 bits (525), Expect = 3e-58
 Identities = 114/258 (44%), Positives = 150/258 (58%), Gaps = 9/258 (3%)

Query: 1   MKLATYNVNGINGRLEVLLRWLAEAKPDVVCLQELKAPNDKFPRREIERAGYGAIWRGQK 60
           M++AT+NVN IN RLE +L W     PDV  LQE+K  ++KFP    ER GY     GQK
Sbjct: 1   MRIATWNVNSINARLEGVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGYNVAVHGQK 60

Query: 61  SWNGVAILARDQEPRETRRGLP---GDPDDSHSRYIEAAIDGI----VIGCLYLPNGNPA 113
           ++NGVA+L++     + R+GLP    D  D  +RYIEA I       V+G +YLPNGNP 
Sbjct: 61  TYNGVALLSK-HPIEDVRKGLPFLSEDEVDEQARYIEAVIAAPTPFRVVG-IYLPNGNPI 118

Query: 114 PGPKFDYKLRWFERLYSYAAELFELDVPVALVGDFNVMPTDLDVYKPERWRDDALFRPEV 173
              KF YKL W  RL+++A  L   + P+ + GD+NV+P   DV  P+ W  DALF+PE 
Sbjct: 119 GTEKFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDVANPQAWLGDALFQPES 178

Query: 174 RAAYAELIAMGWTDAVRLLHPEERIYTFWKYFRNAFARDAGLRIDHFLLSPSLRERLQTC 233
           RAA+  L  +G+ DA          YTFW Y   A+ R+ G+RIDH LLSP   +RL   
Sbjct: 179 RAAFRALKNLGFADAYMQADGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLTGL 238

Query: 234 GVDKFARAWEHTSDHAPV 251
            + +  R  E  SDH PV
Sbjct: 239 VIHRDERDKEKPSDHVPV 256