Pairwise Alignments

Query, 256 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 28/267 (10%)

Query: 1   MIDTHCHLDLYPKPGTVIAEADKRGMFVIAVTTTPKAFLGNIR-MTEGKKR----IRVAV 55
           + DTHCH D  P   T   E  K     +     P     + + +TE  +R    I  A+
Sbjct: 22  LFDTHCHFDFPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIYYAL 81

Query: 56  GLHP---ELVAERHREVEDVCKLMAKTKYV--GEIGIDGSPPHKSSIKLQTEVFARFLTR 110
           G HP   +  +  H    +   + A+   V  GE G+DG       + LQ ++    L+ 
Sbjct: 82  GFHPLYLDASSPTHLPALEKALMQAEQACVAVGECGLDGMID--VDVALQEQMLIAQLSM 139

Query: 111 ASELGGKVLSIHSRGAAALVLDEIERNGHGTLPILHWFSGSKQQVERAAKLGCWFSVGPA 170
           AS+    V+ +HSR     +L  +++       +LH FSGS Q+ ++   LG    VG  
Sbjct: 140 ASQAKLPVI-LHSRRTHNRLLQLLKQQRFQQGGVLHAFSGSVQEAQQFVDLGFKIGVGGV 198

Query: 171 ML--RSRKGRELLASMPRHRLLTETDGPFATDVDRPL--------MPWDVSMALPAIADV 220
           +   R+ K R+ +A++P   ++ ETD P     D PL         P  ++  L  +A++
Sbjct: 199 ITYPRANKTRQAIAALPVEHIVLETDAP-----DMPLNGFQGQANHPAQLAKVLETLAEL 253

Query: 221 WGTTPVGVDQVVSANFRELINATEQGR 247
            G +   +  ++  N + L    EQ R
Sbjct: 254 KGVSAQYLAPILWQNSQMLFGLCEQNR 280