Pairwise Alignments

Query, 404 a.a., replication initiation protein RepC from Agrobacterium fabrum C58

Subject, 436 a.a., replication initiation protein RepC from Sinorhizobium meliloti 1021

 Score =  347 bits (891), Expect = e-100
 Identities = 195/429 (45%), Positives = 266/429 (62%), Gaps = 32/429 (7%)

Query: 1   MEGGQVTTPFGRRPVTLALVKRQIATTKIEEGKSADKWRVFRDASEAREVLGLQDRSLAV 60
           ME G VTTPFGRR +TL ++  QIA   +   +S DKW++FR   EA+ V+G+ DRSLAV
Sbjct: 1   MERGSVTTPFGRRAMTLGMLASQIAAGNVPPDRSVDKWKLFRSLCEAKTVIGVSDRSLAV 60

Query: 61  LDALLSFYPENELRQDAQLVVFPSNIQLSIRAHGIAGATLRRHLALLVEAGLIIRKDSAN 120
           L+ALLSFYP  EL  +  LVVFPSN QLS+R HG+AG TLRRHLA LVE+GLI+R+DS N
Sbjct: 61  LNALLSFYPGAELSGENGLVVFPSNAQLSLRTHGMAGTTLRRHLACLVESGLILRRDSPN 120

Query: 121 GKRYARKDDEGSIEHAFGFDISPLLMRAEELACLAQQVAADRIAFRRAKESLTICRRDIR 180
           GKRYAR+   G++  AFGFD+SPL+ RA+E    A ++AA +   R  +E L++CRRDI 
Sbjct: 121 GKRYARRSRNGAVGEAFGFDLSPLVARADEFKAAAAELAAAKQYHRLMRERLSLCRRDIA 180

Query: 181 KLITAGVEEGASGDWSGLEERYLALVGQIPRNPTLNELSDLGAKMASLREDILKLLNSDD 240
           KL+    +     D    + RY  L   + R   ++++  L   MA LR D+   L    
Sbjct: 181 KLLELLRDSDLPTDCERQQRRYEELSAPLSRKAPVSDVETLHDAMAELRTDLSNQLEKLL 240

Query: 241 FSSEMTTNDAQIERHIQNSNTNHLNELEPSSGNEQG-----------------AKPSQ-- 281
            S +M  ND    +HIQ+S+ +   E EP  G   G                 AK S+  
Sbjct: 241 NSKKMGANDRHNGQHIQSSHPDSQFESEPGLGKGSGKFSAGAQSCNADPVTPTAKLSEVS 300

Query: 282 ---------NKQAGHVPI----KAFPIGLVLRACPEISNYGPEGQIGSWRELMTAAVVVR 328
                    +  +  +PI    +  P+ ++L ACP+I++YGP+G+I +W++L+TAAVVVR
Sbjct: 301 TRIDSQQPVSSVSPSLPISRLAREIPLPVLLSACPQIADYGPQGRITNWKDLLTAAVVVR 360

Query: 329 SMLGVSPSAYQEACEIMGPENAAVTIACILERGGHINSPGGYLRDLTSKAKRGEFSLGPV 388
           +ML VS  AY +AC ++G ENAA  IACILER   I+SPGGYLR LT++A+R  FS+ P+
Sbjct: 361 TMLNVSTDAYDDACTVLGQENAATVIACILERADCISSPGGYLRVLTARARRQAFSVAPM 420

Query: 389 LMALLRAGG 397
           + AL RA G
Sbjct: 421 VAALRRARG 429