Pairwise Alignments

Query, 500 a.a., transposase from Agrobacterium fabrum C58

Subject, 530 a.a., TRm23a transposase from Sinorhizobium meliloti 1021

 Score =  724 bits (1869), Expect = 0.0
 Identities = 349/398 (87%), Positives = 377/398 (94%)

Query: 1   MPAERVAMRRVREILRHRFEEGLGHKSIAVRVGAAPSTVRETLRRLERAGLSWPLAEDVS 60
           MPAER+ MRRVREILR+RFE+GLGHKSIAVRVGAAPSTVRETLRR   A LSWPL +DVS
Sbjct: 1   MPAERLEMRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAIAELSWPLGDDVS 60

Query: 61  DAVLEAALYKAAGTKTGHRRIAEPDWAQVHRELKRKHVTLQILWDEYIGLHPEGYRYSRY 120
           DAVLEAALYKAAGTKTGHRR  EPDWAQVHRELKRKH+TLQILWDEYI  +P+GYRYSR+
Sbjct: 61  DAVLEAALYKAAGTKTGHRRSPEPDWAQVHRELKRKHMTLQILWDEYISRYPDGYRYSRF 120

Query: 121 CDLYRHWALKLPVTMRQDHAAGEKLFVDYAGDTVSVVIDRLSGKTRQAHVFVGVLGASSL 180
           CDLYR WA+KLPVTMRQDHAAG+KLFVDYAGDTV+VV+DRLSGKTRQAH+FV VLGASSL
Sbjct: 121 CDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDRLSGKTRQAHLFVAVLGASSL 180

Query: 181 SFAHARWSGTLPDWIECHLLALETFGGAPALLVPDNAKVAVIKACHFDPQVNRTYTGMAT 240
           S+A ARWS TLPDWIECH+LALE FGGAPALLVPDNAKVA+IKACHFDPQVNRTY GMA 
Sbjct: 181 SYAQARWSETLPDWIECHILALEYFGGAPALLVPDNAKVAIIKACHFDPQVNRTYCGMAA 240

Query: 241 HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRVFYSLADVNKAIGELLHDLNDK 300
           HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHR+FYSLA+VN AIG+LLHDLNDK
Sbjct: 241 HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGQLLHDLNDK 300

Query: 301 RVLRRIGRTRRQLFEELDYPALRPLPVERYVFAEWKIRRAGLDYHVDIDKHFYSVPYRFA 360
           RVLRR+G TRRQLFEELD PALRPLPVERY+FAEW+IRRAGLDYHV+I++H+YSVPYRFA
Sbjct: 301 RVLRRVGATRRQLFEELDRPALRPLPVERYIFAEWRIRRAGLDYHVEIERHYYSVPYRFA 360

Query: 361 REQVEARITANTIEIFYKGERIAAHRRSSGNGKHTTTP 398
           REQVEARITANTIEIF+KGERIAAHRRSSGNGKHT +P
Sbjct: 361 REQVEARITANTIEIFHKGERIAAHRRSSGNGKHTRSP 398