Pairwise Alignments

Query, 274 a.a., IS426 transposase from Agrobacterium fabrum C58

Subject, 281 a.a., Transposase and inactivated derivatives from Pseudomonas stutzeri RCH2

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 29/261 (11%)

Query: 23  SKPRGPYNKAEDAELLPAIRRL-VDQRPTYGYRRIAALLNRERRAADQPVVNAKRVHRIM 81
           ++P+    K ED  LL  I+   ++    YGYR+I   L     +  +      RV R+M
Sbjct: 24  AEPKSAREK-EDQRLLGLIKHAWLESGGVYGYRKIHDDLRELGESCGR-----HRVARLM 77

Query: 82  GNHAMLLEHTAVRKGRLHDGK------------VMVMRSNLRWCSDGLEFACWNGEVIRL 129
               +  +    R+   + GK              V   N  W +D      + G +  L
Sbjct: 78  RVEGLRSQTGYRRRPGYYGGKPTVASPNRLERQFKVSEPNKVWVTDITYIRTYEGWLY-L 136

Query: 130 AFIIDAFDREIIAWTAVANAGISGSDVR-DMMLEAVEKRFHATRAPHAIEHLSDNGSAYT 188
           A ++D F R++I W+         SD+  D +L AV +R    +    +   SD GS ++
Sbjct: 137 AVVLDLFSRQVIGWSMKPRMC---SDLAIDALLMAVWRR----KPRQEVMIHSDQGSQFS 189

Query: 189 ARDTRLFAQALNLTPCFTPVASPQSNGMSEAFVKTLKRDYIRISALPDAQTALRLIDGWI 248
           + D + F +A NL    +   +   N ++E+F + LKR+ IR       + A   +  +I
Sbjct: 190 SSDWQSFLKANNLISSMSRRGNCHDNAVAESFFQLLKRERIRRKTYGTREEARSDVFDYI 249

Query: 249 E-DYNEIHPHSALKMASPRQF 268
           E  YN    HS+    SP +F
Sbjct: 250 EMVYNPKRRHSSAMQLSPVEF 270