Pairwise Alignments

Query, 274 a.a., IS426 transposase from Agrobacterium fabrum C58

Subject, 269 a.a., ISSod1, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.1 bits (118), Expect = 5e-11
 Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 17/245 (6%)

Query: 33  EDAELLPAIRRLVDQ-RPTYGYRRIAALLNRERRAADQPVVNAKRVHRIM--GNHAMLLE 89
           E  +L   +R+L  Q R + G R +   L +E     + +V  K +HR+          +
Sbjct: 22  ETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVR-KIMHRLRLKATQRCAYK 80

Query: 90  HTAVRK------GRLHDGKVMVMRSNLRWCSDGLEFACWNGEVIRLAFIIDAFDREIIAW 143
            T  RK        L +     + +N  W  D        G +  LA ++D + R I+ W
Sbjct: 81  VTTQRKHSDAVADNLLNMNFNPVSANQVWAGDVTYLKTGEGWMY-LAVVMDLYSRRIVGW 139

Query: 144 TAVANAGISGSDVRDMMLEAVEKRFHATRAPHAIEHLSDNGSAYTARDTRLFAQALNLTP 203
                  I      D++ +A+ K ++  +    +   SD GS YT++       +  +  
Sbjct: 140 R------IDKRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRA 193

Query: 204 CFTPVASPQSNGMSEAFVKTLKRDYIRISALPDAQTALRLIDGWIEDYNEIHPHSALKMA 263
               V +   N + E F  +LK D+I   A P  +   + +  +I+ YN    HSA    
Sbjct: 194 SMGDVGACWDNAVVERFFGSLKHDWIFKVAQPTREFMKQDVTAYIKYYNLERLHSANNDL 253

Query: 264 SPRQF 268
           SP +F
Sbjct: 254 SPVEF 258