Pairwise Alignments

Query, 498 a.a., IS21 family transposase from Agrobacterium fabrum C58

Subject, 508 a.a., integrase from Burkholderia phytofirmans PsJN

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 93/414 (22%), Positives = 155/414 (37%), Gaps = 30/414 (7%)

Query: 58  VSTIDHWLDE-----DVKVPRKQRHTAKRVFDRLRDERGFTGGYTIIKDYMRE-RDQRRQ 111
           +S+ + W ++     D  VP    H A      L    G+ G Y+ +   +++ + +   
Sbjct: 71  ISSAEPWREQIAQWHDAGVPGTTIHGA------LVRNHGYEGSYSSVYRLLQQLKAELTP 124

Query: 112 EVFVPLAHPPGHG-QADFGEALVVIG---GVERKAHFFVLDLPHSDGCYVRAYPAAVSEA 167
           +V + L   P    Q DFG    +     G   K  FFV+ L  S   YV        + 
Sbjct: 125 DVPMRLEFKPADAAQVDFGAGPTITDAHTGEIHKTWFFVMTLCWSRHQYVEFVRDQSVDT 184

Query: 168 WVDGHIHAFAFFRAVPQSIVYDNDRCLVAKIL---PDGTRKRAALFSGFLSHYLIRDRYG 224
           W+  H HAF +F  V   ++ DN +C + K     P+  R  A    G    Y  +    
Sbjct: 185 WLLCHRHAFEWFNGVVARVIIDNPKCAIVKACIYEPEVQRAYAQCAEG----YSFKVDPC 240

Query: 225 RPGKGNDKGNVEGLVGYARRNFMVPIPQFPTWEAFNVWLEEQCRKRQRDKLRGESETIGE 284
            P     KG VE  V Y + +F+ P+ +F   +  N   +    +    +  G +  +  
Sbjct: 241 PPRDPAKKGIVESGVKYVKSSFL-PLREFRDLDDANRQAQAWVMQEASTRTHGTTREVPL 299

Query: 285 RLQRDLAAMRMLPASPF--DACDHAGVKVTAQSLARYKTNDYSVPVAYGHQDVWVRGYVN 342
           +   D+    +LP      +    A VKV   +  +++   YSVP     +D+W++    
Sbjct: 300 KRFEDVEQALLLPLPDVQPELATWARVKVHRDAHVQFQRAYYSVPFRLAGKDLWLKATAT 359

Query: 343 EVVIGCRGEIIARHPRSW--DREDVVFDPVHYLPLIEQKINSLDQAAPLQGWDLPEEFAT 400
            V +    E+ A H R         V D  H  P  +       Q    +   +      
Sbjct: 360 MVQLYYEHELSASHVRQTAPGTRSTVAD--HMPPAAQAWQLHDTQWCLREAQRIGPSCHA 417

Query: 401 LRRLMEGRMAKHGRREYVQVLRLLESFELADLHAAVKQALQLGAIGFDAVKHLI 454
           L   + G       R    VLR  + F  + L AA ++A   G   + AVK ++
Sbjct: 418 LVHALFGDQVLIKLRAVQGVLRFAQQFGASRLEAACRRANHFGTPSYKAVKLIL 471