Pairwise Alignments

Query, 498 a.a., IS21 family transposase from Agrobacterium fabrum C58

Subject, 505 a.a., integrase from Burkholderia phytofirmans PsJN

 Score = 81.6 bits (200), Expect = 6e-20
 Identities = 82/313 (26%), Positives = 123/313 (39%), Gaps = 21/313 (6%)

Query: 54  LDAFVSTIDHWLDEDVKVPRKQRHTAKRVFDRLRDERGFTGGYTIIKDYMRERDQRRQEV 113
           L+ F   I  W D DV+           +   L+   G+TG Y+ ++ +++     R   
Sbjct: 74  LEPFREQISSWFDADVQ--------GTTIHSALKRNHGYTGSYSAVRRFLKHLGAERNVT 125

Query: 114 FVPLAH--PPGHGQADFGE--ALVVIGGVERKAHFFVLDLPHSDGCYVRAYPAAVSEAWV 169
              +    P    Q DFG   AL+   G   K  FFV+ L  S   YV        E W+
Sbjct: 126 ATTILDFPPADAAQVDFGAGPALIHESGHTLKTWFFVMTLCWSRHQYVELVFDQTIETWL 185

Query: 170 DGHIHAFAFFRAVPQSIVYDNDRCLVAKIL---PDGTRKRAALFSGFLSHYLIRDRYGRP 226
             H  AF +F   P  I+ DN +C + +     P+  R  A L  G    Y  R     P
Sbjct: 186 ACHRRAFEWFGGCPGRIIIDNAKCAIIRACTYDPEVQRSYAGLAEG----YGFRIDACPP 241

Query: 227 GKGNDKGNVEGLVGYARRNFMVPIPQFPTWEAFNVWLEEQCRKRQRDKLRGES-ETIGER 285
                KG VE  V Y +++FM P+  F      N  L E   +    +  G + E    R
Sbjct: 242 HDPQKKGVVESGVKYVKKSFM-PLRAFRDLPDANRQLREWIMREASVREHGTTREQPLAR 300

Query: 286 LQRDLAAMRMLPASPFDACDHAGVKVTAQSLARYKTNDYSVPVAYGHQDVWVRGYVNEVV 345
              +   +  LP  P      + V V   +  ++    YSVP A   + +WV+     V 
Sbjct: 301 FAIEKPLLTALPDVPPVLAAWSTVTVHRDAHIQHHKALYSVPFALVGKTLWVKSTDTVVQ 360

Query: 346 IGCRGEIIARHPR 358
           +  + E++A HPR
Sbjct: 361 LFHQHELVATHPR 373