Pairwise Alignments

Query, 1266 a.a., conjugation protein from Agrobacterium fabrum C58

Subject, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score = 48.9 bits (115), Expect = 2e-09
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 30/149 (20%)

Query: 396 SERIAVVVGFAGAGKSTMLTAARKAWEAQGY------QVHGAALSGKAAEGLEESSG--- 446
           + R AV+ G  G GK+T +T    A  +Q        ++   A +GKAA  L ES G   
Sbjct: 246 TRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTESMGKAV 305

Query: 447 ----IESRTLASWSYSWDQGRNLIGSS----------------DLFVIDEAGMVGSRQLA 486
               IE    A+   S      L+G+                 DL V+DEA MV    + 
Sbjct: 306 SQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVDLPLMV 365

Query: 487 RFIGEAEERGAKIVLVGDHEQLQAIGAGA 515
           + + EA  + A+++L+GD +QL ++ AGA
Sbjct: 366 KLV-EALPKHARLILLGDKDQLASVEAGA 393



 Score = 47.0 bits (110), Expect = 6e-09
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 665 GDRIIFLENNRDLGVKNGMLGTV---EDVEKGRIVARLDGRGGDSVSIPTDSYQAIDHGY 721
           G  I+   N+  LG+ NG +G      D ++GR+    +   G   ++        +  Y
Sbjct: 575 GRPIMVTRNDHGLGLYNGDIGLCMRDRDDDQGRLKVYFELPDGSIKAVLPSRVPQHETAY 634

Query: 722 ATTIHKNQGATVDRAFVLA----SSTMDRHLAYVAMTRHRDSVQLYADIK 767
           A TIHK+QG+  D   ++     S  + R L Y  +TR +  ++LY D K
Sbjct: 635 AMTIHKSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQLKLYCDNK 684