Pairwise Alignments

Query, 332 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (344), Expect = 5e-37
 Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 28/317 (8%)

Query: 16  NIIQLLVITVIVFALMTWMNPGKFLNYYNFESISYIMPELG---ILSIAMMIAMLTGGID 72
           ++I LL + V+V    +++NP    N++  +++  I+ +     I+++ M + +LT GID
Sbjct: 34  SLIALLFLVVVV----SFLNP----NFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGID 85

Query: 73  LSVVGIANLAGIIAGVYFHSTMVQAGQSSTSGVVFYTGLGIVLAMAVGLLAGLINGLLVA 132
           LSV  +  L G  A     +T+V         +     + +  A+  G   G I+G+++A
Sbjct: 86  LSVGSVLALCGAFA-----ATLV--------AMEVPVLVAVPTALLAGAALGAISGIIIA 132

Query: 133 KLRITPILATLGTGQVLMGLALVLTGG-PAIVGFPDA---WNWIGNGKILGIATPFLLFI 188
           K ++   +ATL T  +L G+ +V T G P   GF D    + W G G  LGI  P  L +
Sbjct: 133 KGKVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMV 192

Query: 189 GVCITVAILLTRSTLGINLMLIGTNPRAAVFAGIRKDRMMLYSYMLTGVLASLAGIILSG 248
            V      LL  +  G  +  +G N  A   +GI  DR+ +  Y + G+LA+LAGII++ 
Sbjct: 193 VVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTS 252

Query: 249 RTNAAKSDYGASYLLQAVLIAVLGGTNPAGGKGRVLGIAIALIALMLLSSGFQMMRFSNH 308
           R ++A+   G  Y L A+   VLGGT+  GGKGR++G  I  + +  L++   ++  S++
Sbjct: 253 RLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSY 312

Query: 309 LIDFIWGAFLILVIAIN 325
                    ++L + ++
Sbjct: 313 YQMIAKAVVILLAVLVD 329