Pairwise Alignments

Query, 332 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score =  127 bits (318), Expect = 5e-34
 Identities = 78/310 (25%), Positives = 151/310 (48%), Gaps = 14/310 (4%)

Query: 20  LLVITVIVFALMTWMNPGKFLNYYNFESISYIMPELGILSIAMMIAMLTGGIDLSVVGIA 79
           LLVI    F ++    P  FL   N   +   +  +G+++  MM  + +   DLSV    
Sbjct: 15  LLVIFAAAFVVVALTVPN-FLTERNMLGLLQSVVTIGVVACTMMFCLASRDFDLSVGSTV 73

Query: 80  NLAGIIAGVYFHSTMVQAGQSSTSGVVFYTGLGIVLAMAVGLLAGLINGLLVAKLRITPI 139
             +G++A +           ++T  +V    LG++ A+A G + GL NG+++A+ RI  +
Sbjct: 74  AFSGMVAVM---------ASNATGSIV----LGLLAALACGGIVGLANGIVIARFRINAL 120

Query: 140 LATLGTGQVLMGLALVLTGGPAIVGFPDAWNWIGNGKILGIATPFLLFIGVCITVAILLT 199
           + TL T Q++ G AL+ + G A+      +  +   K L + TP  +     I    LL 
Sbjct: 121 ITTLATMQIVRGFALIASDGRAVGINDPVFYQLSLSKFLTVPTPIWVMALFFIVFGFLLN 180

Query: 200 RSTLGINLMLIGTNPRAAVFAGIRKDRMMLYSYMLTGVLASLAGIILSGRTNAAKSDYGA 259
           R+  G N + IG NP A+  AG+   RM ++ + L G++ ++AG++L+ R  + + +   
Sbjct: 181 RTVFGKNTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITSGQPNAAT 240

Query: 260 SYLLQAVLIAVLGGTNPAGGKGRVLGIAIALIALMLLSSGFQMMRFSNHLIDFIWGAFLI 319
              L  +   VLGG + AGG+  + G+ + ++ + +  +   ++         + G  L+
Sbjct: 241 GLELSVISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYVVRGLILL 300

Query: 320 LVIAINAWRN 329
           + + ++  R+
Sbjct: 301 IAVLLDNMRS 310