Pairwise Alignments

Query, 325 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (327), Expect = 5e-35
 Identities = 98/334 (29%), Positives = 160/334 (47%), Gaps = 27/334 (8%)

Query: 1   MKFLKSTEFIIACVLLAAMIIIGLINPAFWSLDNIFGLLRSNVVIGIMALGVLLVMISGG 60
           +K LK  E  I  VL   + II +  P+F SL N+  +L  + V  I+ALGV  ++++ G
Sbjct: 11  IKHLK--EGAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQG 68

Query: 61  IDVS----------FTAFAIAAMYLTVRSMVYLGYDGVLIPFVAATLIGLVLGAFNGLII 110
            D+S           +A  + +M    +    LG   +L   ++  LIG ++G  NG+I+
Sbjct: 69  TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIV 128

Query: 111 HRFRMIPLIVTLGTGSIVRGLVLGLVGTSIVNINKMPKELIEFGKTDVISLTSATGSTFG 170
              ++ P I TLGT  IV G+       S+   +     +  F +      T+ T     
Sbjct: 129 AYLKVTPFIATLGTMIIVYGI------NSLYYDSVGASPIAGFDER----FTTFTQGFIR 178

Query: 171 LTAMFLVYLGLALVIHLILTY-----TMIGRSVYAYGGSPEAAKRVGFNTGATIFFVYCI 225
           +      Y+    +I +I  +     T+ G++++A GG+PEAAK  G N   T+  VY +
Sbjct: 179 IGDFRFSYITFYAIIAIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYAL 238

Query: 226 AGALAGFSGLLHSSMIWLANPRDFVGLELDVIAAVVLGGASIFGGRGTVLGTLMGVFMLV 285
           +G    F G+L +  I  A        ELD IAA V+GG S  GG G++ G + GV +  
Sbjct: 239 SGVFYAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFT 298

Query: 286 MVKNSLIIMKVDTTWQRVVVGLIIIIATAITAWR 319
           ++   +  + V   WQ ++ G III A A+ + +
Sbjct: 299 VINYGMTYIGVSPYWQYIIKGSIIIFAVALDSMK 332