Pairwise Alignments

Query, 499 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  332 bits (852), Expect = 1e-95
 Identities = 180/495 (36%), Positives = 302/495 (61%), Gaps = 8/495 (1%)

Query: 1   MTENLIELRHIGKRFGGVKALDDVSLSIRPGEIHCLAGENGSGKSTVIKIMSGVYTPEDG 60
           MT+ ++ L  I K F GVKALD  SL++ PG +  L GENG+GKST++K+++G+Y+ + G
Sbjct: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60

Query: 61  EILIDGKPVGKLDPVKSVHHGIQVIYQDFSLFGNLTVAENLAINTFLMEGRKTVDWRHVR 120
            I   G+PV    P  S   GI +I+Q+ +L   LT+AEN+ +   +      + W  + 
Sbjct: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMH 120

Query: 121 ELAQKALDRLGVSIDLDTDVETLPTSGKQIVAIARAVMADARLIIMDEPTTALTRHEVDA 180
             A + L RL V     T +  L    +Q+V IA+A+  ++++IIMDEPT ALT  E ++
Sbjct: 121 RKADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETES 180

Query: 181 LFKIVRDIQAQGIAVLFVSHKMREMLEISERLTVFRNGKKVAEGPIAEFDEPAITRAMTG 240
           LF ++ +++ QG  ++++SH+++E+ EI + +TV R+GK + E  + + +E  +   M G
Sbjct: 181 LFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVG 240

Query: 241 QELTAHSYKWAPQEGADTPVLEVRNLSVPASVENTDLTLRPGEIVGISGLIGSGRTELAL 300
           ++L     + A Q+G  +  LEV  L+  + V +   TL+ GEI+G+SGL+G+GRTEL  
Sbjct: 241 RKLEEQYPRIAAQQGDIS--LEVIGLT-GSGVHDVSFTLKKGEILGVSGLMGAGRTELMK 297

Query: 301 ALFGMRPDFTGSVRLAGREVHPRTVQEGIACGVAYVPEDRLTEGLFLTQSIERNIIVTSI 360
            ++G  P   G + L GR V+P + Q+G+A G+AY+ EDR  +GL L  S++ N+ + ++
Sbjct: 298 VIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCAL 357

Query: 361 EKFVRGLFINRKKADETTREMFSAMQIVAPGPHTPVNHLSGGNAQRVVLARWLLTGAKVL 420
           ++  +G+ I          +      I  P     + +LSGGN Q+V +A+ L+T  KVL
Sbjct: 358 DQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVL 417

Query: 421 ILNGPTVGVDVGSKAQIHTIIRKLAEKEGLAVLMISDDVPELVQNCNRVLVMHRGRFVDE 480
           IL+ PT GVDVG+K +I+ +I +  + EG++++++S ++PE++   +R+LVMH GR    
Sbjct: 418 ILDEPTRGVDVGAKKEIYQLINQF-KAEGMSIILVSSEMPEVLGMSDRILVMHEGR---- 472

Query: 481 LSGESMTEDAVNDRL 495
           +SGE M  +A  ++L
Sbjct: 473 ISGEFMASEADQEKL 487



 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 68/244 (27%), Positives = 126/244 (51%), Gaps = 14/244 (5%)

Query: 6   IELRHIGKRFGGVKALDDVSLSIRPGEIHCLAGENGSGKSTVIKIMSGVYTPEDGEILID 65
           I L  IG    GV    DVS +++ GEI  ++G  G+G++ ++K++ G    E G I ++
Sbjct: 257 ISLEVIGLTGSGVH---DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLN 313

Query: 66  GKPVGKLDPVKSVHHGIQVIYQDFSLFG---NLTVAENLAINTFLMEGRKTVDWRHVREL 122
           G+ V  + P   + +GI  I +D    G    L+V EN+++   L +  K V  RH  E+
Sbjct: 314 GRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCA-LDQLSKGVQIRHADEV 372

Query: 123 AQKALDRLGVSIDLDTD-----VETLPTSGKQIVAIARAVMADARLIIMDEPTTALTRHE 177
              A+D      ++ T      +  L    +Q VAIA+ +M   +++I+DEPT  +    
Sbjct: 373 I--AVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGA 430

Query: 178 VDALFKIVRDIQAQGIAVLFVSHKMREMLEISERLTVFRNGKKVAEGPIAEFDEPAITRA 237
              +++++   +A+G++++ VS +M E+L +S+R+ V   G+   E   +E D+  +   
Sbjct: 431 KKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMAC 490

Query: 238 MTGQ 241
             G+
Sbjct: 491 AVGR 494