Pairwise Alignments

Query, 800 a.a., glucoamylase from Agrobacterium fabrum C58

Subject, 833 a.a., glucan 1,4-alpha-glucosidase (RefSeq) from Shewanella loihica PV-4

 Score =  296 bits (758), Expect = 3e-84
 Identities = 239/790 (30%), Positives = 365/790 (46%), Gaps = 113/790 (14%)

Query: 5   LDFAPGAPGIDARWTSSAKNGVGTAL------------------SNTSPIWFTLSHGILN 46
           +  APGAPG    W  S K G+GT+                   +  S +WF+L+ GIL 
Sbjct: 45  ISVAPGAPGASPTWAFSGKTGIGTSFEPYVTNAQGADQYLSSQANPVSRVWFSLAQGILT 104

Query: 47  EVYYPRIDSACIRDLGLVVTRDDGYFSEEKRDCTSLT--QPFESGIP---AFHVTNTATD 101
           E  Y  I +A +++   +++ +    +E+    TS+      E+G P   A+ V N   +
Sbjct: 105 ETMYGLIHNAQLKEAQFIISGNGFVDTEKHNTVTSIDYLHKDEAGRPLSLAYKVINKDIE 164

Query: 102 GAYRIEKQVITDPARACVLLHVSFSPLKGKMGDYRVSVLLAPHLVNAGNLNSAWIGDYEG 161
           G Y+IEK   TDP R  +++ V F+  +  +  Y   + + PH+ N+G  + A +   +G
Sbjct: 165 GKYQIEKHFFTDPDRDSLVMQVFFTAFEPGITPY---LYVNPHIDNSGANDIASVSQ-DG 220

Query: 162 RRVLFAVGR--SRYLALVCDGPWRAASAGFVGVSDGWQQLRRHGRLIEEF-----QRADD 214
             +    G   S  L +  D P+ A+S GFVG SDG   L+ +G L   +      +   
Sbjct: 221 NSLFAYTGDKDSSVLTVRGDIPFTASSVGFVGESDGLTDLKANGELNWRYASTSADKQSL 280

Query: 215 GNVSLAAEIDFSDAHDT------ATLALGFGQTEYEAASCAVASLKSGFRRAHDAYIANW 268
           GNV++ A +   +  D        TL  GFG  +  +   A  +LK G+ +   AY    
Sbjct: 281 GNVAMTAALPTLEVGDANRPSLRTTLVFGFGADKASSEQNAKDTLKDGYNKVLAAYNGEG 340

Query: 269 R--GWQD---SLCPLDRDTHHGVNSYRV---STAVLAAHRAADRPGAVVASLSIPWGAS- 319
              GWQD   SL  L+  T +  +  ++   S  VL A       GA++ASLS PWG S 
Sbjct: 341 DAIGWQDYLHSLSSLNAMTANTADEGKLLYTSAMVLKAQEDKTHAGALIASLSNPWGDSV 400

Query: 320 KGDDDLGGYHLIWPRDLVEAAGGFLAAGDHDEALAILDYLRQVQQPS---------GRWP 370
                  GY  +WPRD  + A  FLA GD        +YL++VQ  +         G + 
Sbjct: 401 SAVTGSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVTAATPGYSGVPGWFL 460

Query: 371 QNLWLDGKPYWPGVQMDECAFPILLADMLHRHGHL-DHAARADYMPMIRSAAAYILANGP 429
           Q   +DG+  W GVQ+D+ A PI+L   L + G L D+   + Y  M++ AA ++++ G 
Sbjct: 461 QKTHVDGQIEWVGVQLDQTAMPIMLGWKLWQAGVLSDNEIASWYQTMLKPAADFLISGGE 520

Query: 430 T-------------TGEDRWEEDAGYSPFTLAVEIAALLAAADLLDMEGDAAEATHLRQT 476
                         T ++RWEE  GYSP T A  IA L+ A+D+    GD   +     +
Sbjct: 521 VNLDWNYTQITPLKTQQERWEEQQGYSPSTAAAVIAGLITASDIAKQAGDLNSSEKYLAS 580

Query: 477 ADCWNEQIERWTFAGDQTMCAQLGISG-HYVRIASPGTTDAVQLSGMTPILNQTPDRAFL 535
           A    E+++         + A+ G    +Y+R+A  GT D+         L     RA L
Sbjct: 581 AKSMAEKLDSLVVTQQGLLSAEDGTKAPYYLRLAPNGTPDSADK------LADNNGRAGL 634

Query: 536 PTSDVISPDALALVRFGLRAPDDPHILATVKAIDHC-------LRAELPQG-----PVWY 583
              +V+    L LVR+G+++ +D  I  T+K ID+        +R E         P + 
Sbjct: 635 DQREVLDGGFLELVRYGVKSANDKTINDTLKLIDNTALEDNLRVRYEFTAKDGSTFPGFR 694

Query: 584 RYTGDGYGEH-ADGTAFDGTG------QGRPWPLLTGERAHYELA----------AGRRG 626
           RY  DGYGE  A G  +  +G      +GR WP  TGERAH+ELA          A +  
Sbjct: 695 RYGNDGYGEDTATGANYAESGSNTPGQRGRVWPFFTGERAHFELAKAIADGTLNDASKAQ 754

Query: 627 AAEALLTTMEKSAGQSGLFPEQVWDQPDLPDRELF---YGSPSGSAMPLVWAHAEHIKLL 683
             +  +  ME  A +  + PEQVWD   + D+  F    G  + SA PL W HAE++K++
Sbjct: 755 LVQTYVKGMEAFANEGLMLPEQVWD--GVGDKTRFNYQLGQGTNSATPLAWTHAEYVKMV 812

Query: 684 RSLADGSVFD 693
           RS+ +  V+D
Sbjct: 813 RSITEAKVWD 822