Pairwise Alignments

Query, 625 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (374), Expect = 4e-40
 Identities = 109/427 (25%), Positives = 207/427 (48%), Gaps = 29/427 (6%)

Query: 213 FVAVF-LVLGVPIAFCFGLGTLAYLTFTTWVPTIVMIG----RMDEGMSGIILLSVPVFV 267
           FVA+F L+LG P+AF FG      L F  W   I M      R+   M   +L++VP+FV
Sbjct: 8   FVALFALLLGFPVAFTFGG---IALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFV 64

Query: 268 LLGCVLDATGMGKAIVELLSSMFGHIRAGM--SYVLLGSLFLVS-GISGSKVSDMATVAP 324
            +G VL  T + + ++E +  +FG I  G+  S VL+G+L   S G+ G+ V  M  ++ 
Sbjct: 65  FMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLIS- 123

Query: 325 ALFPEMKRRGHKPKEMIALLATGAAMADTVPPSIVLIVLGSAAGVSIAGLFTS----GFM 380
              P M +  +        +     +   +PPSIVLI+LG   GV +  LF +    G M
Sbjct: 124 --LPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLM 181

Query: 381 IAMVLLLVLAVLARWKAR-----DENMEGAKRTPWPQVGKAALIAAPALVLPFLIRSLVG 435
           +    ++ + + A+   +     + + + ++R    +V KA     P L L  ++   + 
Sbjct: 182 LVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQ---EVVKALKAVIPPLALIVVVLGSIF 238

Query: 436 GGVATATEVSTIAVLYAMIVGAVLYGGISLRKLYSMLVETAALSGAILLILGCASAMAWG 495
            GVAT TE + +    A+++ A+ YG  S   +Y    ET  ++  +  IL  A+A +  
Sbjct: 239 AGVATPTESAALGGAGAILL-ALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMA 297

Query: 496 LTQSGFAFQLTAMITDLPGGWMTYMVVSILIFMILGCVLEGLPAIVLLAPIMFPIARTLG 555
            T +G    +   + +LPG    +++V++L+ +ILG  ++ +    ++ PI+ P+A  + 
Sbjct: 298 FTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMD 357

Query: 556 INDIHYSMVVVVAMNIGLMAPPIGIGFYIACKIG--NVSPDEAMGAIWPYLAAMIIGLLL 613
           ++   +++++ + +    + PP G   +    +   +V+  +    + P++   I+ L+ 
Sbjct: 358 VDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLIS 417

Query: 614 IAAIPGF 620
           +   P F
Sbjct: 418 LMVFPSF 424