Pairwise Alignments

Query, 625 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  170 bits (431), Expect = 1e-46
 Identities = 107/413 (25%), Positives = 204/413 (49%), Gaps = 3/413 (0%)

Query: 212 LFVAVFLVLGVPIAFCFGLGTLAYLTFTT-WVPTIVMIGRMDEGMSGIILLSVPVFVLLG 270
           L V V  +L  PI +   +G  A+       +P       M EG   + LL++P+FVL G
Sbjct: 11  LLVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLAG 70

Query: 271 CVLDATGMGKAIVELLSSMFGHIRAGMSYVLLGSLFLVSGISGSKVSDMATVAPALFPEM 330
           C+++A+G+ + ++ L   + GH+   ++ +      L+ G++ S  +D A +A  L  EM
Sbjct: 71  CIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEM 130

Query: 331 KRRGHKPKEMIALLATGAAMADTVPPSIVLIVLGSAAGVSIAGLFTSGFMIAMVLLLVLA 390
            +RG+       + ++ A +   +PPSI LIV G  A  SI  LF +G +  +VL   L 
Sbjct: 131 SQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVIPGLVLATGLM 190

Query: 391 VLARWKARDENMEGAKRTPWPQV-GKAALIAAP-ALVLPFLIRSLVGGGVATATEVSTIA 448
           V   + AR    +  ++    +  G  ALI    AL +P +I +    G+ T TE   + 
Sbjct: 191 VTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGAVV 250

Query: 449 VLYAMIVGAVLYGGISLRKLYSMLVETAALSGAILLILGCASAMAWGLTQSGFAFQLTAM 508
           V+Y + V    Y   + R++  +L E    S  +++++  A+A  + L        ++  
Sbjct: 251 VVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGW 310

Query: 509 ITDLPGGWMTYMVVSILIFMILGCVLEGLPAIVLLAPIMFPIARTLGINDIHYSMVVVVA 568
           + +     +  +++  ++ +++G  +EG  A+++L P++ PI   +GI+ +H+ +V +  
Sbjct: 311 LGEATDNPLLMLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFITN 370

Query: 569 MNIGLMAPPIGIGFYIACKIGNVSPDEAMGAIWPYLAAMIIGLLLIAAIPGFS 621
           + I  + PP+G   YI+  +  V        + PYLA M++ L++++  P  S
Sbjct: 371 LTIAGITPPVGGLMYISSMVLKVPMMAYAREVLPYLAMMMVILVMLSMFPQLS 423