Pairwise Alignments

Query, 336 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (302), Expect = 4e-32
 Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 2/250 (0%)

Query: 42  HPMNIRAKEAAERIAKETDGQVNISIFPSSQLGADTDVLSQVRSGGVEFFTLSPLILSTL 101
           HP  I A    +R+ +E +G+  + +FP+S L  D  VL  + +G V+    S       
Sbjct: 42  HPKGIAASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKF 101

Query: 102 IPNASISGIGFAFPNYESVWAAMDGDLGKYVRGEIAKQNLVAMDTIWDNGFRQITSASKP 161
                I  + F F + ++V        G+ ++  + ++ +  ++  W NG +QI SA+KP
Sbjct: 102 TKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLE-FWHNGMKQI-SANKP 159

Query: 162 IATPADLESFKIRVPVSPLWTSMFKAFKSAPASINFAEVYTALQTGVVDGQENPLAIIST 221
           I  PAD +  K RV  S +  + F+   + P  ++FAE Y  LQT V+DGQEN  + I  
Sbjct: 160 ILVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYG 219

Query: 222 AKLFEVQKFCSVTNHMWDGFWFLANKRAWERLPDDLRAIVAKNLNQSGKDERADVAKLNA 281
            K FEVQ   + TNH    +  + + + W+ LP D+R   AK LN+   +  A+  K+  
Sbjct: 220 QKYFEVQDGTTETNHGILDYLVVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEE 279

Query: 282 SVKEDLISKG 291
             K+ +I  G
Sbjct: 280 LNKQYIIEAG 289