Pairwise Alignments

Query, 336 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (322), Expect = 2e-34
 Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 5/274 (1%)

Query: 48  AKEAAERIAKETDGQVNISIFPSSQLGADTDVLSQVRSGGVEFFTLSPLILSTLIPNASI 107
           AK  A+ + + + G++ ++++PS+QLG D  +L Q+  G ++        +   IP A  
Sbjct: 42  AKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEA 101

Query: 108 SGIGFAFPNYESVWAAMDGDLGKYVRGE-IAKQNLVAMDTIWDNGFRQITSASKPIATPA 166
             + +   +++ +    + D G+ VR E + K N  A+DT W NG R+ TS ++P+ +  
Sbjct: 102 VMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDT-WYNGTRETTS-NRPLNSIE 159

Query: 167 DLESFKIRVPVSPLWTSMFKAFKSAPASINFAEVYTALQTGVVDGQENPLAIISTAKLFE 226
           D +  K+RVP +    +  K   ++P  ++F+EVY ALQT  VDGQENPL  I T K +E
Sbjct: 160 DFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYE 219

Query: 227 VQKFCSVTNHMWDGFWFLANKRAWERLPDDLRAIVAKNLNQSGKDERADVAKLNASVKED 286
           VQK  ++T+H+ +    + ++  W++L D  + I+ K + + G      V    A +   
Sbjct: 220 VQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSF 279

Query: 287 LISKGMTFNDTDATLFRAALKEAGFYSEWKGKYG 320
             S+G+     D   FR A++    Y E+    G
Sbjct: 280 FKSEGINVTYPDLEPFREAMQP--LYKEFDSNIG 311