Pairwise Alignments

Query, 336 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score =  132 bits (331), Expect = 2e-35
 Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 4/328 (1%)

Query: 5   RRSILAGAGSAV-LATAFVSRAHAAQYNYKYANNLPAAHPMNIRAKEAAERIAKETDGQV 63
           R+ +LA    A  L+ A  + A     N + +N +   HP+    K     + +++ G++
Sbjct: 2   RKLLLATTAIAFGLSAAAPAFAEFNDRNIRVSNGINEDHPVGNGIKAMQACLDQKSGGKL 61

Query: 64  NISIFPSSQLGADTDVLSQVRSGGVEFFTLSPLILSTLIPNASISGIGFAFPNYESVWAA 123
            ++ F    LG D      +RSG  E    S   L  +IP   +  + F F N +  +  
Sbjct: 62  KLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFANAQEAYTV 121

Query: 124 MDGDLGKYVRGEIAKQNLVAMDTIWDNGFRQITSASKPIATPADLESFKIRVPVSPLWTS 183
           +DGD G  +  ++    LV +   W+NGFR ++++ +P+    D E  K+RV  + ++  
Sbjct: 122 LDGDFGDMMNEKLEAAGLVNL-AYWENGFRNLSNSVRPVTKWEDFEGMKVRVMQNNIFLD 180

Query: 184 MFKAFKSAPASINFAEVYTALQTGVVDGQENPLAIISTAKLFEVQKFCSVTNHMWDGFWF 243
            F+   +    + F EV++AL+T  +D QENP   I T+K FEVQK+ + TNH +  F F
Sbjct: 181 TFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNHAYTPFLF 240

Query: 244 LANKRAWERLPDDLRAIVAKNLNQSGKDERADVAKLNASVKEDLISKGMTFNDTDA-TLF 302
           L +K  ++    + +A + +       +ER  +  LN    E +   G+  N   A    
Sbjct: 241 LFSKPIFDSYTPEEQAALRECAVVGRDEERKVIQDLNKKSLEKIKEAGLEVNTLSAEEQA 300

Query: 303 RAALKEAGFYSEWKGKYGDEAW-AILEK 329
           R   K    Y + K + G E   AIL K
Sbjct: 301 RIREKSMVVYEKHKAEIGAEVVDAILAK 328