Pairwise Alignments

Query, 336 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 21/307 (6%)

Query: 1   MNINRRSILAG--AGSAV-LATAFVSRAHAAQYNYKYANNLPAAHPMNIRAKEAAERIAK 57
           M  +RR+ L G  AG+A+ LAT  + RA   +   +     P  HP N  A +  E +  
Sbjct: 1   MTFSRRTFLGGVAAGAALSLATPSLVRAQETR-TLRLGIVTPPGHPWNNAALKVGEALKA 59

Query: 58  ETDGQVNISIFPSSQLGADTDVLSQVRSGGVEFFTLSPLILSTLIPNASISGIGFAFPNY 117
           ET+G+++IS+FP+ QLG +  +L Q++SG ++   +    L + IP  +     +   + 
Sbjct: 60  ETNGRLSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDST 119

Query: 118 ESVWAAMDGDLGKYVRGEIAKQNLVAMDT-------IWDNGFRQITSASKPIATPADLES 170
             V         K VR  +A + L  +          W     ++  ++K IA   D+  
Sbjct: 120 AKV--------AKLVREPVAMKLLDVLPAETGTVGLAWGITTMRVVFSAKEIAGLDDING 171

Query: 171 FKIRVPVSPLWTSMFKAFKSAPASINFAEVYTALQTGVVDGQENPLAIISTAKLFEVQKF 230
            K+R+  +P +   ++   +AP  I    V+ A+  G VDG E  L      +  +V K 
Sbjct: 172 MKLRINTTPAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKT 231

Query: 231 CSVTNHMWDGFWFLANKRAWERLPDDLRAIVAKNLNQSGKDERADVAKLN-ASVKEDLIS 289
               N ++     LA+ R W+ LP+  R I+A+ L +S  DE+ D    N  ++ E    
Sbjct: 232 MLKMNAIFMPCVALASGRVWQTLPEADREIIAR-LTKSALDEQIDATVANEPALLEKFAG 290

Query: 290 KGMTFND 296
            G+   D
Sbjct: 291 AGIPIKD 297