Pairwise Alignments

Query, 546 a.a., acyl-CoA synthetase from Agrobacterium fabrum C58

Subject, 511 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (499), Expect = 1e-54
 Identities = 150/523 (28%), Positives = 252/523 (48%), Gaps = 27/523 (5%)

Query: 23  NLSHFLTQAARRNPDHIGFVWGEKTWSWAQMEARVDAMAHALETEFGVRKGDRILVQSSN 82
           ++ +++ ++A R  +    ++  K WS+  ++ +   +A +LE+  GV++ D + + S N
Sbjct: 4   SIGNWVGRSAARFGNKPAIIFEGKYWSFLDIDVQSSRLAASLES-MGVKREDVVSIYSPN 62

Query: 83  NNQMFESMFACFRVGAVWVPTNYRQSPDEVAYLAKASGARGMICAS----AFPDHAKASH 138
           + +   + +A  ++GA+  P N   +  E A+  K  GA  +   S    A  +H   + 
Sbjct: 63  SPEWIITYYAILKIGAIVNPLNTMLTAREAAFAIKNCGAVAVFSTSDKLLALQEHIGPTE 122

Query: 139 EASTIDFS--IAIGTAEFGEDYDAIVARHMGRKVKSQAVDRDDPCWFFFTSGTTGRPKAA 196
             S I F      G   F    DA VA    R+     + +DD     +TSGTTG+PK A
Sbjct: 123 VISLISFDGITVAGMRHFNLLVDANVAV---REYPVTGIQKDDISTIGYTSGTTGQPKGA 179

Query: 197 VLTHGQMAFVITN-HLCDLMPGTGPDDASIVVAPLSHGAG-IHQLVQVAHGAKTVLPAAE 254
           VL+H     ++TN  +   M      D ++   PLSH  G +     +A+G   VL   +
Sbjct: 180 VLSH---RCILTNVSMTATMHLRTASDIAVSALPLSHVYGNVVMNSAIAYGMTLVLH--K 234

Query: 255 KLDVPAVWALIEKWRITNAFTVPTILKMLVEDPSVDRFDHSSLRYVIYAGAPMYRADQKR 314
             D  A+ + I+ +  T    VPT+   L+  P++  +D SSL      G  M     + 
Sbjct: 235 TFDAEAILSSIQIYGATLLEGVPTMYIYLLNCPNLGAYDVSSLTRCTVGGQMMPYTAMEN 294

Query: 315 ALAKLGPVLVQYFGLGEVTGNITVLPPSFHNAEDGPETRVGTCGFDRTGMEVQIQNDA-- 372
               LG  L++ +G+ E+ G  T      H+     E R+G+ G     +E +I      
Sbjct: 295 VERALGCRLLELWGMTELGGLGTT-----HSLYG--ERRLGSIGVALPHLEARIAQLELD 347

Query: 373 AEEVGAGETGEICVIGPAVFAGYYDNPEANAKAFRN-GWFRTGDLGHRDENGFLYITGRA 431
            + +  GE GE+ + GP V   Y   P+A A+   + GW RTGDL   D  GF+YI  R 
Sbjct: 348 GDALPLGEIGELQIRGPVVMKHYLGRPDATAETKTDEGWLRTGDLARMDSEGFIYIVDRL 407

Query: 432 SDMYISGGSNIYPREIEEKILMHPDISETAVLGVPDAVWGEVGVAVCVAREGADIAAIDL 491
            DM+I+ G NIYP E+E  I  HP ++  AV  V D + GE+  A  V + G +I    +
Sbjct: 408 KDMFITAGFNIYPAELERVIAEHPSVAMVAVGSVLDEIKGELAKAYIVPKTGYEIDIQQI 467

Query: 492 KAYLEGKMARYKLPKSVVFWDAMPKSAYGKITKKMIREELEKR 534
           + +   ++A YK+P+     + +PK++ GK+ ++M+R+  E +
Sbjct: 468 ERHCRDRLAAYKVPRLFQIVEDLPKTSSGKVMRRMLRQIFESK 510