Pairwise Alignments

Query, 356 a.a., GDP-mannose 4,6-dehydratase from Agrobacterium fabrum C58

Subject, 377 a.a., GDP-mannose 4,6-dehydratase Gmd from Phaeobacter inhibens DSM 17395

 Score =  439 bits (1128), Expect = e-128
 Identities = 210/350 (60%), Positives = 268/350 (76%), Gaps = 10/350 (2%)

Query: 4   KRALIIGVTGQDGAYLSELLLAKGYMVHGLKRRSSSFNTGRIDHLYQDPFEEDLRFRLHF 63
           K+ALI GVTGQDG+YL+E LL KGY VHGLKRR+SSFNT R+DH+YQDP  +  RF+LH+
Sbjct: 7   KKALITGVTGQDGSYLAEFLLEKGYEVHGLKRRASSFNTQRVDHIYQDPHTDHARFKLHY 66

Query: 64  GDLTDATNLCRVIQEVQPDEIYNLGAQSHVQVSFETPEYTANADALGTLRLLEAMRILNL 123
           GDLTD +NL R++ E++PDE+YNLGAQSHV VSFE PEYTA+ D +GTLRLLEA+R L L
Sbjct: 67  GDLTDTSNLTRLLSEIEPDEVYNLGAQSHVAVSFEVPEYTADVDGIGTLRLLEAIRFLGL 126

Query: 124 GDRCRFYQASTSELFGGMGTVAQHEGTPFYPRSPYAAAKLYAYWMTVNYRESYGFHASNG 183
             + RFYQASTSEL+G +    Q E TPFYPRSPYA AKLY+YW+TVNYRE+YG +A NG
Sbjct: 127 EKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKLYSYWITVNYREAYGMYACNG 186

Query: 184 ILFNHESPIRGETFVTRKITRGVAAIERGLMSKLRLGNLDAKRDWGHARDYVEGMWRIVQ 243
           ILFNHESP RGETFVTRKITRG+A I +GL   L +GN+DA RDWGHA+DYV   W ++Q
Sbjct: 187 ILFNHESPRRGETFVTRKITRGLANIAQGLEECLYMGNIDALRDWGHAKDYVRMQWMMLQ 246

Query: 244 QEIPEDYVLATGEAHTVREFVELAFGVVGKTIEWHGDGSDEVGY----------DAKTGN 293
           QE+PED+V+ATG+ ++VR+F+  +   +G T+ + G+G +E+              K G+
Sbjct: 247 QEVPEDFVIATGKQYSVRQFITWSAQELGLTLAFSGEGVEEIATVTAIEGDMAPALKVGD 306

Query: 294 SIIEIDPRYFRPAEVDFLLGDPSKARRKLDWSHSTSFCDLVQEMVEADLR 343
            ++ IDPRYFRPAEV+ LLGDP+KA++KL W    +  ++  EMV  DL+
Sbjct: 307 VVLRIDPRYFRPAEVETLLGDPTKAKQKLGWVPEITTEEMCAEMVREDLK 356