Pairwise Alignments

Query, 356 a.a., GDP-mannose 4,6-dehydratase from Agrobacterium fabrum C58

Subject, 356 a.a., GDP-mannose 4,6-dehydratase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  441 bits (1133), Expect = e-128
 Identities = 218/347 (62%), Positives = 263/347 (75%), Gaps = 5/347 (1%)

Query: 4   KRALIIGVTGQDGAYLSELLLAKGYMVHGLKRRSSSFNTGRIDHLYQDPFEEDLR----F 59
           K ALI G+TGQDG+YL+E LL KGY VHG+ RRSSSFNTGRI+HLY D +  D++     
Sbjct: 2   KTALISGITGQDGSYLAEFLLQKGYEVHGILRRSSSFNTGRIEHLYFDEWVRDMKQKRTI 61

Query: 60  RLHFGDLTDATNLCRVIQEVQPDEIYNLGAQSHVQVSFETPEYTANADALGTLRLLEAMR 119
            LH+GD+TD+++L R+IQ+VQPDEIYNL AQSHV+VSF+ PEYTA ADA+GTLR+LEA+R
Sbjct: 62  NLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAIGTLRMLEAVR 121

Query: 120 ILNLGDRCRFYQASTSELFGGMGTVAQHEGTPFYPRSPYAAAKLYAYWMTVNYRESYGFH 179
           IL L  + R YQASTSELFG +  V Q E TPFYPRSPY  AK Y +W+T NYRESYG  
Sbjct: 122 ILGLETKTRIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQYGFWITKNYRESYGMF 181

Query: 180 ASNGILFNHESPIRGETFVTRKITRGVAAIERGLMSKLRLGNLDAKRDWGHARDYVEGMW 239
           A NGILFNHES  RGETFVTRKI+   A I +G   KL LGNLDA+RDWG+A+DYVE MW
Sbjct: 182 AVNGILFNHESERRGETFVTRKISLAAARIAQGEQDKLYLGNLDARRDWGYAKDYVECMW 241

Query: 240 RIVQQEIPEDYVLATGEAHTVREFVELAFGVVGKTIEWHGDGSDEVGYDAKTGNSIIEID 299
            I+Q ++PED+V+ATGE HTVREF  LAF   G  + W G+G DE G D  TG  ++E+D
Sbjct: 242 LILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGVDEKGIDVATGKVLVEVD 301

Query: 300 PRYFRPAEVDFLLGDPSKARRKLDWS-HSTSFCDLVQEMVEADLRLV 345
           P+YFRPAEV+ LLGDP+KAR  L W+   TSF +LV  MV  D+  V
Sbjct: 302 PKYFRPAEVEQLLGDPTKARTLLGWNPRKTSFGELVSIMVRHDMEKV 348