Pairwise Alignments

Query, 342 a.a., ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 12/194 (6%)

Query: 129 GALGFAYNSDLLQRQGLPVPSCWKDLISETYRGKILAGNP--NSSGTAFTMLATLVQLFG 186
           G  G  YNS  L   G+   + W DL  + Y  +++  +   +  G A  +    +    
Sbjct: 128 GITGLYYNSSTLPN-GI---TKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN 183

Query: 187 EEE---AFSYMKALDQNVAEYTKAGSAPVKAAARGEAVIGISFMHDAVTQKEAGAPLVIV 243
           EEE   A+  + AL +NV  Y     AP      GEA +G+ +  +A   +     L  V
Sbjct: 184 EEEIKKAYESLVALKKNVLLYNS--DAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFV 241

Query: 244 APCEGTGYEIGAVSIVRGTKNREEARRFVDFALSPDGQA-TGAAAGQNQVPSNAKAALPA 302
            P EG    +   +I  G+KN   A +F++F   P+ QA    + G        +A LPA
Sbjct: 242 MPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPA 301

Query: 303 GAPDLSLIKMVDYD 316
              D   I   D D
Sbjct: 302 ELRDNPTIFPSDED 315