Pairwise Alignments

Query, 507 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 516 a.a., cryptochrome/photolyase family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  358 bits (920), Expect = e-103
 Identities = 200/511 (39%), Positives = 291/511 (56%), Gaps = 13/511 (2%)

Query: 6   LILGDQLSPSIAALDGVDKKQDTIVL-CEVMAEASYVGHHKKKIAFIFSAMRHFAEELRG 64
           LILGDQL+ + +     + + D + L  E+  E  YV HH +K    F+AM+ FA+ L  
Sbjct: 8   LILGDQLNHAHSWFS--EHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFADYLSA 65

Query: 65  EGYRVRYTRIDDADNAGSFTGEVKRAIDDLTPSRICVTEPGEWRVRSEMDGFAGAFGIQV 124
           EG+ V +  +D +         + +    +         P E+R+  +M     + GI +
Sbjct: 66  EGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQMANLRLS-GITI 124

Query: 125 DIRSDRRFLSSHGEFRNWAAGRKSLTMEYFYREMRRKTGLLMNGE-QPVGGRWNFDAENR 183
                  FL    E        K++ ME+FYR MR++ G LM  + +P GG+WNFDA+NR
Sbjct: 125 GCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFDADNR 184

Query: 184 QPAR-PDLLRPKHPVFAPDKITKEVIDTVERLFPDNFGKL-ENFGFAVTRTDAERALSAF 241
              + PDLL+   P+   + +   +   +ER    + G++ E+  + + R  A   L+ F
Sbjct: 185 NKLKSPDLLQLPTPLCFDNPVAS-IKARIERHRIPSIGQVGESLLWPINRAQALSLLAHF 243

Query: 242 IDDFLCNFGATQDAMLQDDPN---LNHSLLSFYINCGLLDALDVCKAAERAYH--EGGAP 296
               L NFG  QDAM    P+   L HS LSF +N  LL   +V +A   AY   +G   
Sbjct: 244 CQICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQGQIS 303

Query: 297 LNAVEGFIRQIIGWREYMRGIYWLAGPDYVDSNFFENDRSLPVFYWTGKTHMNCMAKVIT 356
           L  VEGF+RQI+GWREY+RG+YW   P Y   N     R LP ++W G+T M C+ + IT
Sbjct: 304 LAQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQAIT 363

Query: 357 ETIENAYAHHIQRLMITGNFALLAGIDPKAVHRWYLEVYADAYEWVELPNVIGMSQFADG 416
           ++++  YAHHIQRLM+TGNFALL   DP  V  WYL +Y DA EWVELPN  GM+ FADG
Sbjct: 364 QSLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALFADG 423

Query: 417 GFLGTKPYAASGNYINRMSDYCDTCRYDPKERLGDNACPFNALYWDFLARNREKLKSNHR 476
           G + TKPY+ASG+YIN+MSDYC +C Y  K + G+ ACP N+LYW F+ ++R++L +N R
Sbjct: 424 GLIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLANNPR 483

Query: 477 LAQPYATWARMSEDVRHDLRAKAAAFLRKLD 507
           +   Y TW +M+ D +  + + A A+L +++
Sbjct: 484 IGMLYKTWDKMTSDSQQAILSTADAYLSQIE 514