Pairwise Alignments

Query, 230 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 4e-31
 Identities = 66/196 (33%), Positives = 106/196 (54%), Gaps = 5/196 (2%)

Query: 20  LPIILIGLTVTLKAAAAGFAIALVLGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLVQL 79
           LPI L GL  T+   +    I L+  +  A+ R S+ K  S P    + FLR TPLLVQL
Sbjct: 10  LPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQL 69

Query: 80  FFLYYVLPEFGIVLP-----AFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATALN 134
           + +YY + ++  V       A+    +A  L  +AYT+E+ RG +  +  G+ EAA A  
Sbjct: 70  YLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAYG 129

Query: 135 LTRMQTYRDIIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFEYL 194
           ++R QTY+ II+P A+ R +PA  N ++ M+  + V  +VT++++ G A ++  R +   
Sbjct: 130 MSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAPF 189

Query: 195 VPLTLVGLIFLLLTII 210
                 GL ++ LT I
Sbjct: 190 EAFLSAGLFYMALTFI 205