Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  136 bits (342), Expect = 8e-37
 Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 16/302 (5%)

Query: 20  VIALIAVMLIFGTFADNFLSLATFGSVAFQLPELGLLTLAMLLPLLTGGINLSVTFAANL 79
           +IAL+ ++++      NF ++    ++  Q     ++ + M L +LT GI+LSV     L
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLAL 94

Query: 80  SGLAAAWVLQAHGGVDAPPSAFLFACLAALVTGGAAGAMTGAAIAYTRAHPILVTLSMMI 139
            G  AA ++     ++ P    L A   AL+ G A GA++G  IA  +    + TL  M 
Sbjct: 95  CGAFAATLV----AMEVP---VLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMT 147

Query: 140 FLRGLGEFLTRGGDVS-GFPAY---MAPLGHGTLLGLPIPL-LIFIVCVGIWHVLLTRTK 194
            LRG+    T G  +S GF       A  G G  LG+P+P+ L+ +V  G W+ LL  T+
Sbjct: 148 LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWY-LLNHTR 206

Query: 195 LGFGLLMIGSNIEAARYSGLNTRKIQVLVYTLSGLMCAVAGIIMLARFNSVRVGHGESYL 254
            G  +  +G N  A R SG+N  ++++ VY + GL+ A+AGII+ +R +S +   G  Y 
Sbjct: 207 FGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYE 266

Query: 255 LITVLAAFLGGINPFGGFGRVLPVFVALIVLQLLSSGLNLLGAN---QHLATALWGVLMI 311
           L  + A  LGG +  GG GR++   +  +++  L++ LNLL  +   Q +A A+  +L +
Sbjct: 267 LDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAV 326

Query: 312 VV 313
           +V
Sbjct: 327 LV 328