Pairwise Alignments

Query, 338 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  123 bits (309), Expect = 6e-33
 Identities = 92/312 (29%), Positives = 151/312 (48%), Gaps = 26/312 (8%)

Query: 15  LVVMVLLCTGLSFATDRFLTISNAFDVLNVSAVNIIFAVGLLVVLISGGIDISFAVAASV 74
           LV+ + +   L+  T +F   SN  +++      +I AVG + V++ GG+D+S     SV
Sbjct: 26  LVIAIAMALWLAATTSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVGGLDLSIG---SV 82

Query: 75  VQYVT-VLALNALGGGNWAEGFIIAGAVGLSLGFVNAFLVWRLNIISIVATISTFNIFFG 133
           V + T +LAL+  G       F++AG +G +    N + V RL++  IVAT+S   I  G
Sbjct: 83  VSFTTAILALDLPGFVTIPAVFVLAGLIGAT----NGYCVTRLSVHPIVATLSMQYIVLG 138

Query: 134 LLMFF--TKGVSIYDLPEWLSTRVVFYEREMPDGSWVELTLPVVVMILCCVATWFMISRT 191
           +        G ++ D   W           M +GS   + LPV   I+  +  W ++  +
Sbjct: 139 ITRVLRPVSGGAVPDSVRW-----------MVEGSLFGIPLPVFWGIVTMLVAWKLLYGS 187

Query: 192 TVGRKLYAFGD-----NPEGARRFGINIGAMHYISFGWLGLMAGIAGLMQAHYAQEVVPN 246
             G  L+A G      + + AR FGI       +++    L A +AG+  A       PN
Sbjct: 188 RYGLHLFAIGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPN 247

Query: 247 ALYGRELDVLAATVLGGARLGGGKGSVIGCVLGVLMVSITQNGLNLMGVSPFAFKMIVGA 306
                ELD + A  +GG +L GG GS+ G V+GV  +++  NG+NL+ V+PF    I G 
Sbjct: 248 VGLLMELDAITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKGI 307

Query: 307 IILVAITLSSTR 318
           +++  + L S +
Sbjct: 308 LLMAVVALQSRK 319