Pairwise Alignments

Query, 284 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 327 a.a., autoinducer 2 ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  343 bits (880), Expect = 3e-99
 Identities = 178/286 (62%), Positives = 212/286 (74%), Gaps = 2/286 (0%)

Query: 1   MEAGIKEQSNKLGVDGFMVGPTSADPALQVRAIEDLIAQKVDFIGVVPNDAKVLEPVLKK 60
           MEAGIK ++ K G+D + VGPTSADPALQVRAIEDLIAQKVD IGVVPNDA+VLEPVLK+
Sbjct: 42  MEAGIKSEAAKRGIDAWQVGPTSADPALQVRAIEDLIAQKVDVIGVVPNDARVLEPVLKR 101

Query: 61  AQAAGIKVITHESPEQLGADWDFELASAKGFGEAHGKLLGEKMGGKGSYAVFVGSLTVPL 120
           A  AGIKVI HESP+Q  ADWDFE+  A   G  H   L + M  KG YAV+VGSLTVPL
Sbjct: 102 AHDAGIKVIVHESPDQKYADWDFEMVDATQHGINHMIALAQCMKEKGDYAVYVGSLTVPL 161

Query: 121 HNAWADAAIAYIKANYPDMKLVGDRYGVAEDLDKSRSTALDLMSANADLKGFLAFGSQGP 180
           H  WADAAI Y K +YPDM LVGD++GV E LD S  T  DLMS +A+LKG LA GSQGP
Sbjct: 162 HQKWADAAINYQKEHYPDMHLVGDKFGVGESLDDSIRTTNDLMSKDANLKGILAIGSQGP 221

Query: 181 IGAGRAVEERRKDGKVFVIGPFSPGQGAKLIKSGALTGGFMWNPKQAGEVFITLADRIAK 240
           IGAGRAV  R K   + V GPFSPGQGA L+K+GA+ GGF+WNP  AGEVF+ +A+++ K
Sbjct: 222 IGAGRAVLNRGKTDDICVFGPFSPGQGASLVKAGAIKGGFIWNPMVAGEVFVRIAEKLEK 281

Query: 241 GETPKAGDTIEGLG--TIDPKGNTIVVDQLLKIDKESIDKLVSMGL 284
           GE    G TIEG+G   +D   +TI+ ++   +DK ++ KLV MGL
Sbjct: 282 GEKITDGMTIEGMGKVKVDEATHTILGNETESLDKANLPKLVKMGL 327