Pairwise Alignments

Query, 627 a.a., transcriptional regulator from Agrobacterium fabrum C58

Subject, 591 a.a., Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  279 bits (714), Expect = 2e-79
 Identities = 197/616 (31%), Positives = 311/616 (50%), Gaps = 58/616 (9%)

Query: 27  ESWRRCLDTYQLDPTKAREAVIVSETRLREHRQQAEDLLHIARSGLERLYRQV-AEQNYV 85
           +SW R      L   K  + + ++   L E     + L+++ +     L+ Q+ A     
Sbjct: 13  DSWSRSQGA-GLSEAKLPQELRLNAEALAERHHANKQLINLTKQHALPLFNQMMAHSQSR 71

Query: 86  LLLSDRQGVTVEFLGDPSFNNNLRKAGLYLGSEWSEPRAGTCAVGACIATGESLTIHQTD 145
           L+LSDR G  +   G   +++ L    L +G  W E   GT A+G  +   +++ +    
Sbjct: 72  LILSDRDGYVLCHWGVSRYSDKLANVALDVGVNWREEHKGTNAIGTALTARQTVAVIGEQ 131

Query: 146 HFDVTHTPLSCTAAPIYDTQGALTAVLDISLLSSPILKTSQNMARHLVSSTVRRIELANL 205
           HF   H  +SCTA+PI+  +G L   +DI+  S     T Q +   L++S V++IE A L
Sbjct: 132 HFIRHHRFMSCTASPIFSPEGELLGAIDIT--SEQQRHTQQTLV--LIASLVQQIETALL 187

Query: 206 MASSRHDLVLRFAGAPEFLDVDPEAALSVDGSGRITGMTHAAARLLAASRGLDWRMPERL 265
                    +  A  P  +    +  +  +  G++ G    A RLL   R          
Sbjct: 188 CHLPGSHYRIDLAEQPSLITSGWQGIVVANVDGKLLGCNAMAKRLLHRPR---------- 237

Query: 266 LGQRVEEFFEAGLDELASLTRSSLPQDRRIVVRDGTVLYAHAIEPQQRRSSVPLARSKP- 324
           +G  ++    A  +     +   + QD+R+            ++ QQ      L  ++P 
Sbjct: 238 IGDDIDRHLGASWN-----SGEQVCQDQRL-----------HLKTQQ------LVETRPS 275

Query: 325 QPVTERIGGD--GPAVRNLRRKVEKLSPARLPILLQGQTGTGKEHLARIIHDASGVSGR- 381
           Q V+++IG     P +    ++  K+    +P+L+ G+TG GKE   + +H  S  + R 
Sbjct: 276 QLVSQQIGVRFRDPKLERAWQQANKVVGRNIPLLICGETGVGKEQFVKKLHGQSTRAQRP 335

Query: 382 FVAVNCAAIPEQLIESELFGYLPGAFTGALAKGRKGLVEEAQGGTLFLDEIGDMPFAAQS 441
            VAVNCAA+P +L+ESELFGY  GAFTGA  +G +G + +A GG LFLDEIG+MP A QS
Sbjct: 336 LVAVNCAALPAELVESELFGYQAGAFTGASRQGFEGKIRQADGGFLFLDEIGEMPLATQS 395

Query: 442 RLLRVLAEGEVLPVGGSTPQKVDFRVISASHRPLNDMVRTGAFREDLYYRLNAAVLTLPA 501
           RLLRVL E EV+PVGG+   KVD +V++A+H  L  +V  GAFREDLYYRLN   ++LP 
Sbjct: 396 RLLRVLQEREVVPVGGNRSYKVDIQVVAATHADLRQLVSEGAFREDLYYRLNGLQVSLPP 455

Query: 502 LSERDDFPWLLDRILEKHGMPGRPLTLSNAARLTILHHRWPGNIRELDNAIAFAAALCD- 560
           L +R D   ++ ++  ++    + L      RL  L H WPGN+RELDN +  A  + D 
Sbjct: 456 LRQRADIERIIHKLHRRYRQAPQQLCPQLLRRL--LAHDWPGNLRELDNLMQVACLMADG 513

Query: 561 DGLITVEDLPEQLT-----PASSTPMIDSRGTDLRALLAA--------CNGNISEAARRL 607
           D  +  + LP+ L      P  +   + +  ++L  ++ A          GN+S  A+ L
Sbjct: 514 DPELNWQHLPDTLQAQLQGPEQAGEQMAACESELSLMVNANIVSSFHRFEGNVSRCAKHL 573

Query: 608 GVDRTTLHRRMRRLGI 623
           G+ R TL+R+++ LG+
Sbjct: 574 GISRNTLYRKLKALGL 589