Pairwise Alignments

Query, 647 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

Subject, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  239 bits (610), Expect = 3e-67
 Identities = 143/344 (41%), Positives = 208/344 (60%), Gaps = 2/344 (0%)

Query: 304 TALSRIAEGDVTYRIAQPFVPNLDGIRGDFNRAAEQLQSTLTQVAQNARGIDAGANEIRS 363
           T +SR+AEGD+   +++ +      +    N +   L++ + ++  ++  +   + EI  
Sbjct: 337 TVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIAD 396

Query: 364 AADDLARRTEQQAAAVEETAAALEEITTTVKDSTKRAQEAGHLVGRAKIGAEKSGEVVQK 423
             +DL++R E QA+ +EETAA++EEIT TV+ +   A++A  L   A   A + GEVV +
Sbjct: 397 GNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGE 456

Query: 424 AVSAMEQIATSANEISNIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVREL 483
           A+SAM  I T++ +I++II VIDEIAFQTNLLALNA VEAARAG+ G+GFAVVA EVR L
Sbjct: 457 AISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNL 516

Query: 484 AQRSANAAKEIKNLITTSNGQVQQGVQLVGETGRALELIVTEVQEINRHVAAISESAQEQ 543
           AQRSA AAKEIK LI  S  +V +G +LV E+G  L+ IV  V  ++  +A I+ S+ EQ
Sbjct: 517 AQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQ 576

Query: 544 SSGLQQINTAVNQMDQDTQKNAAMVEESTAASHGLAREASSLNRLIAQFKLSEAGYAETA 603
           S+G+ +IN A+  MD+ TQ+NA++VEE++AAS  L  E   L  L+  F           
Sbjct: 577 STGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVTENNVTTFER 636

Query: 604 APMRTASAADRPAVSPARALGGRIRAAFSGNAALNTAADNWEEF 647
            P ++     +P VS  +A   +        AA     D WEEF
Sbjct: 637 KPRQSTPPKTKPVVSMHKAPINQAVHKMPARAA--EEGDEWEEF 678